RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 C1QTNF9P0C862 333 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 IFNGR1P15260 489 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 GALK1P51570 392 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 CBX2Q14781 532 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 ZNF605Q86T29 641 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 ANKLE2Q86XL3 938 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 JAMLQ86YT9 394 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 KRTAP1-3Q8IUG1 177 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 CRACR2BQ8N4Y2 399 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 MCMBPQ9BTE3 642 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 MCOLN1Q9GZU1 580 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 MYOCOSA0A1B0GUC4 107 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 A0A1W2PQ27 194 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 A0A1W2PQ64 194 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 A0A1W2PQC6 194 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 A0A1W2PQD8 194 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 C2orf71A6NGG8 1288 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 ETV2O00321 342 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 NOP56O00567 594 aaKnown RBP5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 DNAJA1P31689 397 aaKnown RBP5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 CORO7P57737 925 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 RBM10P98175 930 aaKnown RBP5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 MVKQ03426 396 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 ADGRF1Q5T601 910 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 TMEM132EQ6IEE7 984 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 NUP43Q8NFH3 380 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 ZNF408Q9H9D4 720 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
HMGB3P23-201ENST00000414981 TRBV23OR9-2A0A075B6M9 112 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 L1CAMP32004 1257 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 SEPHS1P49903 392 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 ZC3H6P61129 1189 aaKnown RBP5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 KIR3DS1Q14943 382 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 DPY19L1Q2PZI1 675 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 C6orf15Q6UXA7 325 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 CILP2Q8IUL8 1156 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 MRGPRX3Q96LB0 322 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 TOX2Q96NM4 488 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 PDLIM7Q9NR12 457 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 CYP26B1Q9NR63 512 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 KLHL14Q9P2G3 628 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 APEX2Q9UBZ4 518 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 BACE2Q9Y5Z0 518 aa5.79□□□□□ -1.48
HMGB3P23-201ENST00000414981 DDAH1O94760 285 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 DLG4P78352 724 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 JAG1P78504 1218 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 SRSF3P84103 164 aaKnown RBP5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 NR1I3Q14994 352 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 LARP1BQ659C4 914 aaKnown RBP5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 ATG14Q6ZNE5 492 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 TRIM59Q8IWR1 403 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 COPS5Q92905 334 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 TNFRSF12AQ9NP84 129 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 CD320Q9NPF0 282 aa5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 SMG5Q9UPR3 1016 aaKnown RBP5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 R3HCC1Q9Y3T6 440 aaKnown RBP5.78□□□□□ -1.48
HMGB3P23-201ENST00000414981 TCAF2A6NFQ2 919 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 KCNH1O95259 989 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 PAMP19021 973 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 CCDC140Q96MF4 163 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 EPN3Q9H201 632 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 GCM1Q9NP62 436 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 SIRT5Q9NXA8 310 aa5.77□□□□□ -1.49
HMGB3P23-201ENST00000414981 A0A1W2PQJ5 194 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 STXBP3O00186 592 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 SRGAP3O43295 1099 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 KLF4O43474 513 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 MSL3P1P0C860 447 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 HOXC12P31275 282 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 VIPR1P32241 457 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 RAB3GAP1Q15042 981 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 KCNA10Q16322 511 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 SV2CQ496J9 727 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 GTF2IRD2BQ6EKJ0 949 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 PAQR3Q6TCH7 311 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 ANKS3Q6ZW76 656 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 EEPD1Q7L9B9 569 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 GTF2IRD2Q86UP8 949 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 SIAH1Q8IUQ4 282 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 MICAL1Q8TDZ2 1067 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 MMP19Q99542 508 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 MBD1Q9UIS9 605 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P23-201ENST00000414981 NPHP3-ACAD11A0A0J9YXS1 232 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 SUSD5O60279 629 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 GJB6O95452 261 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 CYBBP04839 570 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 SDHBP21912 280 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 CFPP27918 469 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 MAPKAPK2P49137 400 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 NAALADL2Q58DX5 795 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 AMIGO3Q86WK7 504 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 ZSCAN18Q8TBC5 510 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 PPP1R14AQ96A00 147 aa5.75□□□□□ -1.49
HMGB3P23-201ENST00000414981 CNTD2Q9H8S5 307 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms