RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 GRIN2DO15399 1336 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 TNKSO95271 1327 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 NCOR2Q9Y618 2525 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 CHD9Q3L8U1 2897 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 MYH13Q9UKX3 1938 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ABHD14A-ACY1A0A1B0GW23 586 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 LINC01553A4QN01 128 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 F5H6K3 240 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 H3BQ06 376 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PITPNM1O00562 1244 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NCK2O43639 380 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 KPNA6O60684 536 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 EFCAB14O75071 495 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARHGEF15O94989 841 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PARNO95453 639 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NDUFB10O96000 172 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 IQCF3P0C7M6 154 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CYP2D6P10635 497 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PDE6AP16499 860 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CDK8P49336 464 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CPT1AP50416 773 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PTPN5P54829 565 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ERVK-21P61565 698 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PSMC6P62333 389 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ATP8B2P98198 1209 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CNTN2Q02246 1040 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 EVX2Q03828 476 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZP2Q05996 745 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PTPN11Q06124 597 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 KLRC3Q07444 240 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 POLA2Q14181 598 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PTPROQ16827 1216 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 LRRFIP1Q32MZ4 808 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 TKFCQ3LXA3 575 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM47CQ5HY64 1035 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 C12orf60Q5U649 245 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NFRKBQ6P4R8 1299 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 EP400NLQ6ZTU2 488 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 KIAA1211Q6ZU35 1233 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 HFE2Q6ZVN8 426 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 C16orf86Q6ZW13 317 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 EEPD1Q7L9B9 569 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 AACSQ86V21 672 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM133AQ8N9E0 248 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CAGE1Q8TC20 777 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NEK9Q8TD19 979 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 GDPD5Q8WTR4 605 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 EAF2Q96CJ1 260 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PABPC5Q96DU9 382 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CRBNQ96SW2 442 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NUP88Q99567 741 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 POP1Q99575 1024 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 RAD9AQ99638 391 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 MTG1Q9BT17 334 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC8Q9H0W5 538 aaPredicted RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 IRF2BPLQ9H1B7 796 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACAD9Q9H845 621 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARMT1Q9H993 441 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC38A10Q9HBR0 1119 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 VTA1Q9NP79 307 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 A1CFQ9NQ94 594 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 PDGFCQ9NRA1 345 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 HOMER2Q9NSB8 354 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ATP8A2Q9NTI2 1148 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 POLR3EQ9NVU0 708 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 TLR7Q9NYK1 1049 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NYAP2Q9P242 653 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 FEM1BQ9UK73 627 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 MTUS1Q9ULD2 1270 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 COG6Q9Y2V7 657 aa2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 NOP58Q9Y2X3 529 aaKnown RBP2.84□□□□□ -1.95
RNU4-53P-201ENST00000410828 ASTN1O14525 1302 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 RAD50Q92878 1312 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF532Q9HCE3 1301 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 ACACBO00763 2458 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 TECTAO75443 2155 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF236Q9UL36 1845 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLXNA1Q9UIW2 1896 aa2.84□□□□□ -1.96
RNU4-53P-201ENST00000410828 CYP2D7A0A087X1C5 515 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 LOC102724159A0A0B4J2E5 919 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 TCRBV5S4A2TA0A5A2 114 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 LCHNA4D1U4 455 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 SOWAHBA6NEL2 793 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 C19orf67A6NJJ6 358 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 GOLIM4O00461 696 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 NKRFO15226 690 aaKnown RBP eCLIP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PRKAB2O43741 272 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 GFRA3O60609 400 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 BCAR3O75815 825 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 MBD4O95243 580 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 GJB5O95377 273 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 MYL3P08590 195 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PTGS1P23219 599 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 IRS1P35568 1242 aa2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 RARSP54136 660 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 WDR5P61964 334 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 PURAQ00577 322 aaKnown RBP2.83□□□□□ -1.96
RNU4-53P-201ENST00000410828 IKBKEQ14164 716 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms