RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 KIF2AO00139 706 aaPredicted RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 RFPL3O75679 317 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 ADH7P40394 386 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 STAT1P42224 750 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 SKIV2L2P42285 1042 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 MTHFRP42898 656 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 CYP4A11Q02928 519 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 RABEP1Q15276 862 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 SLC45A4Q5BKX6 768 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 CAVIN4Q5BKX8 364 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 CNSTQ6PJW8 725 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 VPS52Q8N1B4 723 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 NAA15Q9BXJ9 866 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 ZFYVE28Q9HCC9 887 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 MAN1C1Q9NR34 630 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 PTPRGP23470 1445 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 FSD2A1L4K1 749 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 POTEFA5A3E0 1075 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 GABRDO14764 452 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 MYO1BO43795 1136 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 INPP5BP32019 993 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 SP140Q13342 867 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 LAPTM5Q13571 262 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 ARHGEF6Q15052 776 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 ANKRD1Q15327 319 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 C5orf22Q49AR2 442 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 TRIM68Q6AZZ1 485 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 RABGGTAQ92696 567 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 CLMNQ96JQ2 1002 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 CNDP2Q96KP4 475 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 MYD88Q99836 296 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 VEZTQ9HBM0 779 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 TCF7L1Q9HCS4 588 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 LUC7LQ9NQ29 371 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 PAPOLBQ9NRJ5 636 aaKnown RBP6.4□□□□□ -1.38
CNGA1-202ENST00000402813 TMEM98Q9Y2Y6 226 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 TACC3Q9Y6A5 838 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 SLC4A7Q9Y6M7 1214 aa6.4□□□□□ -1.38
CNGA1-202ENST00000402813 KDM2BQ8NHM5 1336 aa6.4□□□□□ -1.39
CNGA1-202ENST00000402813 MT-ND3P03897 115 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 PYGLP06737 847 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 EN1Q05925 392 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 CNGA3Q16281 694 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC178Q5BJE1 867 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SLC6A19Q695T7 634 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ITPRIPL1Q6GPH6 555 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 KDELC1Q6UW63 502 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 DZIP1Q86YF9 867 aaKnown RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 LURAP1LQ8IV03 231 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TBC1D21Q8IYX1 336 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ZNF540Q8NDQ6 660 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ANKK1Q8NFD2 765 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 NSUN6Q8TEA1 469 aaKnown RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 KCNH8Q96L42 1107 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 MRPL11Q9Y3B7 192 aaKnown RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TNKSO95271 1327 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 RAD50Q92878 1312 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 hCG_1642624A0A1W2PR95 340 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 IMPDH2P12268 514 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SCNN1DP51172 638 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 PRSS12P56730 875 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 AP2B1P63010 937 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 LHFPL2Q6ZUX7 228 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 EPHX4Q8IUS5 362 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TBC1D22AQ8WUA7 517 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 KCTD13Q8WZ19 329 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 FNIP2Q9P278 1114 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 C17orf113A0A1B0GUU1 675 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 H0YHG0 523 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SASH1O94885 1247 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 DNTTP04053 509 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 USP8P40818 1118 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SCARB2Q14108 478 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 PPP2R5EQ16537 467 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 EML3Q32P44 896 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 MTERF2Q49AM1 385 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 C1orf53Q5VUE5 145 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 RNF219Q5W0B1 726 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 ZER1Q7Z7L7 766 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 LRRC43Q8N309 656 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 EPS8L3Q8TE67 593 aaKnown RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 CCT6BQ92526 530 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SYMPKQ92797 1274 aaKnown RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 DHTKD1Q96HY7 919 aaPredicted RBP6.39□□□□□ -1.39
CNGA1-202ENST00000402813 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 KIAA1683Q9H0B3 1180 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 SEMA4AQ9H3S1 761 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TBC1D7Q9P0N9 293 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 CRYL1Q9Y2S2 319 aa6.39□□□□□ -1.39
CNGA1-202ENST00000402813 TRIM17Q9Y577 477 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms