RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 NFAT5O94916 1531 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 RDXP35241 583 aaKnown RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 FAM76AQ8TAV0 307 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 PANK4Q9NVE7 773 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 HPSEQ9Y251 543 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 CTIFO43310 598 aaKnown RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 PNMA6AP0CW24 399 aaPredicted RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 SLC16A2P36021 539 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 CFAP58Q5T655 872 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 RBM26Q5T8P6 1007 aaKnown RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 ZNF710Q8N1W2 664 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 LSM14BQ9BX40 385 aaKnown RBP20.56■□□□□ 0.88
USP48-204ENST00000400301 CACNA1FO60840 1977 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 KDM3AQ9Y4C1 1321 aa20.56■□□□□ 0.88
USP48-204ENST00000400301 KCNJ6P48051 423 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 KIAA0753Q2KHM9 967 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 PRR16Q569H4 304 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 SERPINB13Q9UIV8 391 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 PCDHA1Q9Y5I3 950 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 GOLGA6L10A0A0M3HER8 536 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 BBOX1O75936 387 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 ZYXQ15942 572 aaKnown RBP20.55■□□□□ 0.88
USP48-204ENST00000400301 NYAP1Q6ZVC0 841 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 SND1Q7KZF4 910 aaKnown RBP eCLIP20.55■□□□□ 0.88
USP48-204ENST00000400301 MAP3K14Q99558 947 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 ZBTB21Q9ULJ3 1066 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 ANKRD7Q92527 254 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 ADGRG1Q9Y653 693 aa20.55■□□□□ 0.88
USP48-204ENST00000400301 CFBP00751 764 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 AFAP1L1Q8TED9 768 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 THAP9Q9H5L6 903 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
USP48-204ENST00000400301 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 WDR24Q96S15 920 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 HINFPQ9BQA5 517 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 CCDC151A5D8V7 595 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 RNF187Q5TA31 235 aaPredicted RBP20.54■□□□□ 0.88
USP48-204ENST00000400301 CCDC174Q6PII3 467 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 KCTD1Q719H9 257 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 RETREG2Q8NC44 543 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 EPC1Q9H2F5 836 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 KIAA1024Q9UPX6 916 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 CALUO43852 315 aaPredicted RBP20.54■□□□□ 0.88
USP48-204ENST00000400301 GCNT3O95395 438 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 CYP27A1Q02318 531 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
USP48-204ENST00000400301 NUCKS1Q9H1E3 243 aaKnown RBP20.54■□□□□ 0.88
USP48-204ENST00000400301 ABHD10Q9NUJ1 306 aa20.54■□□□□ 0.88
USP48-204ENST00000400301 TTLL1O95922 423 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 MRPL44Q9H9J2 332 aaKnown RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 PDE11AQ9HCR9 933 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 ACTN4O43707 911 aaKnown RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 GRM4Q14833 912 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 SLFN13Q68D06 897 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 CTNNBL1Q8WYA6 563 aaPredicted RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 TCRBV5S4A2TA0A5A2 114 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 ATP8B1O43520 1251 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 NT5C2P49902 561 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 CERKLQ49MI3 558 aaPredicted RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 GPATCH4Q5T3I0 446 aaKnown RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 IRX2Q9BZI1 471 aaPredicted RBP20.53■□□□□ 0.88
USP48-204ENST00000400301 FRMD4BQ9Y2L6 1034 aa20.53■□□□□ 0.88
USP48-204ENST00000400301 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 POLR2FP61218 127 aaKnown RBP20.52■□□□□ 0.88
USP48-204ENST00000400301 ZBED6P86452 979 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 C12orf60Q5U649 245 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 CD209Q9NNX6 404 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 STK17AQ9UEE5 414 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 GOLGA6BA6NDN3 693 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 BUB1O43683 1085 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 PLEKHA4Q9H4M7 779 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 PCDHB13Q9Y5F0 798 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 ZEB2O60315 1214 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 GNA14O95837 355 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 TROAPQ12815 778 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 CFAP221Q4G0U5 840 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 RGS22Q8NE09 1264 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 ARHGEF10LQ9HCE6 1279 aa20.52■□□□□ 0.88
USP48-204ENST00000400301 A0A1B0GTH6 734 aa20.52■□□□□ 0.87
USP48-204ENST00000400301 CETN2P41208 172 aa20.52■□□□□ 0.87
USP48-204ENST00000400301 UBE2SQ16763 222 aa20.52■□□□□ 0.87
USP48-204ENST00000400301 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.87
USP48-204ENST00000400301 MYCT1Q8N699 235 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 DYDC1Q8WWB3 177 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
USP48-204ENST00000400301 LGALS16A8MUM7 142 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 NCAPHQ15003 741 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 MAN2A1Q16706 1144 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
USP48-204ENST00000400301 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
USP48-204ENST00000400301 TMEM110-MUSTN1A8MSY1 372 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 USP17L5A8MUK1 530 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 ICA1Q05084 483 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 ADAM9Q13443 819 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
USP48-204ENST00000400301 TC2NQ8N9U0 490 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms