RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TCP11X2Q5H9J9 407 aa26.72■■□□□ 1.87
PABPN1-202ENST00000397276 DCAF8Q5TAQ9 597 aa26.72■■□□□ 1.87
PABPN1-202ENST00000397276 UBXN4Q92575 508 aa26.72■■□□□ 1.87
PABPN1-202ENST00000397276 MRPL44Q9H9J2 332 aaKnown RBP26.72■■□□□ 1.87
PABPN1-202ENST00000397276 LZTFL1Q9NQ48 299 aa26.72■■□□□ 1.87
PABPN1-202ENST00000397276 TUBB4AP04350 444 aa26.71■■□□□ 1.87
PABPN1-202ENST00000397276 COPB1P53618 953 aaKnown RBP26.71■■□□□ 1.87
PABPN1-202ENST00000397276 COA1Q9GZY4 146 aa26.71■■□□□ 1.87
PABPN1-202ENST00000397276 ZCCHC17Q9NP64 241 aaKnown RBP26.71■■□□□ 1.87
PABPN1-202ENST00000397276 CYP2C19P33261 490 aa26.71■■□□□ 1.87
PABPN1-202ENST00000397276 POTEDQ86YR6 584 aa26.71■■□□□ 1.87
PABPN1-202ENST00000397276 CCSER1Q9C0I3 900 aa26.71■■□□□ 1.87
PABPN1-202ENST00000397276 MPHOSPH10O00566 681 aaKnown RBP26.7■■□□□ 1.87
PABPN1-202ENST00000397276 ZRANB2O95218 330 aaKnown RBP eCLIP26.7■■□□□ 1.873e-7■□□□□ 11.1
PABPN1-202ENST00000397276 TXKP42681 527 aa26.7■■□□□ 1.87
PABPN1-202ENST00000397276 MAPK8IP2Q13387 824 aaPredicted RBP26.7■■□□□ 1.87
PABPN1-202ENST00000397276 REXO1Q8N1G1 1221 aaKnown RBP26.7■■□□□ 1.87
PABPN1-202ENST00000397276 PANX2Q96RD6 677 aa26.7■■□□□ 1.87
PABPN1-202ENST00000397276 RAD21O60216 631 aa26.7■■□□□ 1.86
PABPN1-202ENST00000397276 MFAP3LO75121 409 aa26.7■■□□□ 1.86
PABPN1-202ENST00000397276 LIMA1Q9UHB6 759 aaKnown RBP26.7■■□□□ 1.86
PABPN1-202ENST00000397276 KLRG2A4D1S0 409 aaPredicted RBP26.69■■□□□ 1.86
PABPN1-202ENST00000397276 RNF225M0QZC1 329 aaPredicted RBP26.69■■□□□ 1.86
PABPN1-202ENST00000397276 HNRNPH2P55795 449 aaKnown RBP26.69■■□□□ 1.86
PABPN1-202ENST00000397276 ADSSL1Q8N142 457 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 KCNQ5Q9NR82 932 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 KBTBD4Q9NVX7 518 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 CDK5RAP2Q96SN8 1893 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 LAD1O00515 517 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 KLRC4O43908 158 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 CASQ1P31415 396 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 PARP3Q9Y6F1 533 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 UBXN1Q04323 297 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 ANKRD20A12PQ8NF67 263 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 ZBTB9Q96C00 473 aa26.69■■□□□ 1.86
PABPN1-202ENST00000397276 NUP88Q99567 741 aaPredicted RBP26.69■■□□□ 1.86
PABPN1-202ENST00000397276 SRGNP10124 158 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 PRPHP41219 470 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 GABPAQ06546 454 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 MNS1Q8NEH6 495 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 RIOX1Q9H6W3 641 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 SERPINB13Q9UIV8 391 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 CCDC175P0C221 793 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 SLC16A2P36021 539 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 TTBK2Q6IQ55 1244 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 TMCO3Q6UWJ1 677 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 NEK11Q8NG66 645 aa26.68■■□□□ 1.86
PABPN1-202ENST00000397276 SRRTQ9BXP5 876 aaKnown RBP26.68■■□□□ 1.86
PABPN1-202ENST00000397276 MYH1P12882 1939 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 CACNB3P54284 484 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 IRF2BP1Q8IU81 584 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 LRRC10BA6NIK2 292 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 NFIAQ12857 509 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 TRIM47Q96LD4 638 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 DBNDD1Q9H9R9 158 aa26.67■■□□□ 1.86
PABPN1-202ENST00000397276 ZNF219Q9P2Y4 722 aaPredicted RBP26.67■■□□□ 1.86
PABPN1-202ENST00000397276 TADA3O75528 432 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 SASH3O75995 380 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 COL23A1Q86Y22 540 aaPredicted RBP26.66■■□□□ 1.86
PABPN1-202ENST00000397276 HPS3Q969F9 1004 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.66■■□□□ 1.86
PABPN1-202ENST00000397276 PCDHAC2Q9Y5I4 1007 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 FAM196BA6NMK8 535 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 TPM1P09493 284 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 CAPN2P17655 700 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 SPAG1Q07617 926 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 MSL1Q68DK7 614 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 ADGRG1Q9Y653 693 aa26.66■■□□□ 1.86
PABPN1-202ENST00000397276 GOLGA6L9A6NEM1 432 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 PDE4DQ08499 809 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 CDC42EP5Q6NZY7 148 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 CNGA4Q8IV77 575 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 ZFPM1Q8IX07 1006 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 UIMC1Q96RL1 719 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 H7C1D1 291 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 TDP2O95551 362 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 NOVP48745 357 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 ASIC1P78348 528 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 TCP10Q12799 353 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 UBE2SQ16763 222 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 KCTD1Q719H9 257 aa26.65■■□□□ 1.86
PABPN1-202ENST00000397276 ZNF622Q969S3 477 aaKnown RBP eCLIP26.65■■□□□ 1.862e-8■■□□□ 11.7
PABPN1-202ENST00000397276 FCER1AP12319 257 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 AK8Q96MA6 479 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 SLC37A4O43826 429 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 RHOBTB3O94955 611 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 TTLL1O95922 423 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 KCNB1Q14721 858 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 ACRBPQ8NEB7 543 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 MMTAG2Q9BU76 263 aaKnown RBP26.64■■□□□ 1.86
PABPN1-202ENST00000397276 TRIM9Q9C026 710 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 CALCOCO1Q9P1Z2 691 aa26.64■■□□□ 1.86
PABPN1-202ENST00000397276 PSMA7O14818 248 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 TNNI2P48788 182 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 ADCY7P51828 1080 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 STK4Q13043 487 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 STIM1Q13586 685 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 CCDC96Q2M329 555 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 ADGRF4Q8IZF3 695 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 GIMAP8Q8ND71 665 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms