RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NFIBO00712 420 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 SLC27A2O14975 620 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 COL6A1P12109 1028 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 RNF20Q5VTR2 975 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 CREB3L3Q68CJ9 461 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 CCDC144CPQ8IYA2 1237 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 MB21D2Q8IYB1 491 aaPredicted RBP20.41■□□□□ 0.86
UPK3A-202ENST00000396082 C7orf61Q8IZ16 206 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 ADGRF4Q8IZF3 695 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 ABHD16BQ9H3Z7 469 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 VAT1LQ9HCJ6 419 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 FAM184BQ9ULE4 1060 aa20.41■□□□□ 0.86
UPK3A-202ENST00000396082 SOWAHBA6NEL2 793 aa20.4■□□□□ 0.86
UPK3A-202ENST00000396082 ACVR2BQ13705 512 aa20.4■□□□□ 0.86
UPK3A-202ENST00000396082 BAATQ14032 418 aaPredicted RBP20.4■□□□□ 0.86
UPK3A-202ENST00000396082 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
UPK3A-202ENST00000396082 ADD3Q9UEY8 706 aaKnown RBP20.4■□□□□ 0.86
UPK3A-202ENST00000396082 KLRF2D3W0D1 207 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 CALML3P27482 149 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 MCM5P33992 734 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 ANTXR2P58335 489 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 CATIPQ7Z7H3 387 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 RNF180Q86T96 592 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.85
UPK3A-202ENST00000396082 LENG1Q96BZ8 264 aaPredicted RBP20.39■□□□□ 0.85
UPK3A-202ENST00000396082 ABCB11O95342 1321 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 LCTP09848 1927 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 PRC1O43663 620 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 PGK1P00558 417 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 GRM4Q14833 912 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 LRRC41Q15345 812 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 QRICH1Q2TAL8 776 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 SLC30A10Q6XR72 485 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 JMJD4Q9H9V9 463 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 SENP2Q9HC62 589 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 PPP4R2Q9NY27 417 aa20.38■□□□□ 0.85
UPK3A-202ENST00000396082 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
UPK3A-202ENST00000396082 CCDC144BQ3MJ40 725 aa20.37■□□□□ 0.85
UPK3A-202ENST00000396082 NFXL1Q6ZNB6 911 aa20.37■□□□□ 0.85
UPK3A-202ENST00000396082 FBXO11Q86XK2 927 aa20.37■□□□□ 0.85
UPK3A-202ENST00000396082 NUP133Q8WUM0 1156 aa20.37■□□□□ 0.85
UPK3A-202ENST00000396082 PURBQ96QR8 312 aaKnown RBP20.37■□□□□ 0.85
UPK3A-202ENST00000396082 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
UPK3A-202ENST00000396082 MAD2L2Q9UI95 211 aa20.37■□□□□ 0.85
UPK3A-202ENST00000396082 PALM3A6NDB9 673 aaPredicted RBP20.36■□□□□ 0.85
UPK3A-202ENST00000396082 RPS6P62753 249 aaKnown RBP20.36■□□□□ 0.85
UPK3A-202ENST00000396082 LRRC26Q2I0M4 334 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
UPK3A-202ENST00000396082 EEPD1Q7L9B9 569 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 IGDCC4Q8TDY8 1250 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 TMEM87BQ96K49 555 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 SPC25Q9HBM1 224 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 LRRC37A2A6NM11 1700 aa20.36■□□□□ 0.85
UPK3A-202ENST00000396082 ASTN1O14525 1302 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 SYNRGQ9UMZ2 1314 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 CCDC69A6NI79 296 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
UPK3A-202ENST00000396082 ADCYAP1R1P41586 468 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 ALDH5A1P51649 535 aaPredicted RBP20.35■□□□□ 0.85
UPK3A-202ENST00000396082 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 CHRDL2Q6WN34 429 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 HOMER1Q86YM7 354 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 ZNF654Q8IZM8 581 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
UPK3A-202ENST00000396082 FERMT2Q96AC1 680 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 MTA3Q9BTC8 594 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 AMNQ9BXJ7 453 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 LY9Q9HBG7 655 aa20.35■□□□□ 0.85
UPK3A-202ENST00000396082 ZMYND8Q9ULU4 1186 aaPredicted RBP20.35■□□□□ 0.85
UPK3A-202ENST00000396082 MRPL11Q9Y3B7 192 aaKnown RBP20.35■□□□□ 0.85
UPK3A-202ENST00000396082 DDAH1O94760 285 aa20.34■□□□□ 0.85
UPK3A-202ENST00000396082 TROAPQ12815 778 aa20.34■□□□□ 0.85
UPK3A-202ENST00000396082 MCF2L2Q86YR7 1114 aa20.34■□□□□ 0.85
UPK3A-202ENST00000396082 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
UPK3A-202ENST00000396082 KATNBL1Q9H079 304 aa20.34■□□□□ 0.85
UPK3A-202ENST00000396082 GPHNQ9NQX3 736 aaPredicted RBP20.34■□□□□ 0.85
UPK3A-202ENST00000396082 DDX49Q9Y6V7 483 aaKnown RBP20.34■□□□□ 0.85
UPK3A-202ENST00000396082 CEP290O15078 2479 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 B4DLN1 442 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 SH2B2O14492 632 aaPredicted RBP20.33■□□□□ 0.85
UPK3A-202ENST00000396082 ZBTB5O15062 677 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 ADAMTS4O75173 837 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 C6orf222P0C671 652 aaPredicted RBP20.33■□□□□ 0.85
UPK3A-202ENST00000396082 SYN1P17600 705 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 KIF5BP33176 963 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
UPK3A-202ENST00000396082 TNFAIP2Q03169 654 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 TMTC2Q8N394 836 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 MYL10Q9BUA6 226 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 VTA1Q9NP79 307 aa20.33■□□□□ 0.85
UPK3A-202ENST00000396082 COLQQ9Y215 455 aaPredicted RBP20.33■□□□□ 0.85
UPK3A-202ENST00000396082 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 ADCY6O43306 1168 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 RTP1P59025 263 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 PDE4DQ08499 809 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
UPK3A-202ENST00000396082 RGS22Q8NE09 1264 aa20.32■□□□□ 0.84
UPK3A-202ENST00000396082 NEK1Q96PY6 1258 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms