RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
CPSF7-202ENST00000394888 FRMPD2Q68DX3 1309 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-202ENST00000394888 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 STK4Q13043 487 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 HPS3Q969F9 1004 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 LDHCP07864 332 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CPSF7-202ENST00000394888 SIAH1Q8IUQ4 282 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 ACRBPQ8NEB7 543 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 C7orf25Q9BPX7 421 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 ZMYND15Q9H091 742 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 VPS16Q9H269 839 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 ST7Q9NRC1 585 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 MTMR7Q9Y216 660 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 FCER1AP12319 257 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 KCNK18Q7Z418 384 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 CCDC148Q8NFR7 591 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 TBCKQ8TEA7 893 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 CHP1Q99653 195 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 CARD6Q9BX69 1037 aa17.35■□□□□ 0.37
CPSF7-202ENST00000394888 KLK7P49862 253 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 DNAJC7Q99615 494 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 JMJD4Q9H9V9 463 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-202ENST00000394888 ZSCAN12O43309 604 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 GTF2IP78347 998 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 ST5P78524 1137 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 DMTNQ08495 405 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 CTAGE1Q96RT6 745 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 NAA15Q9BXJ9 866 aaKnown RBP17.34■□□□□ 0.37
CPSF7-202ENST00000394888 SEMA6BQ9H3T3 888 aa17.34■□□□□ 0.37
CPSF7-202ENST00000394888 CCP110O43303 1012 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 NFIAQ12857 509 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 ANKRD40Q6AI12 368 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 CPLX3Q8WVH0 158 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 HAS1Q92839 578 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 COA7Q96BR5 231 aa17.33■□□□□ 0.37
CPSF7-202ENST00000394888 PYM1Q9BRP8 204 aaKnown RBP17.33■□□□□ 0.37
CPSF7-202ENST00000394888 TTC26A0AVF1 554 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 LGALS16A8MUM7 142 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 CCNT1O60563 726 aaKnown RBP17.33■□□□□ 0.36
CPSF7-202ENST00000394888 SASH3O75995 380 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 TDP2O95551 362 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 HSPA1LP34931 641 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 LRRC47Q8N1G4 583 aaKnown RBP17.33■□□□□ 0.36
CPSF7-202ENST00000394888 MB21D1Q8N884 522 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.36
CPSF7-202ENST00000394888 COL4A5P29400 1685 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 AMPD2Q01433 879 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 TTBK2Q6IQ55 1244 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
CPSF7-202ENST00000394888 GLIS3Q8NEA6 775 aa17.33■□□□□ 0.36
CPSF7-202ENST00000394888 MYL1P05976 194 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 NAPAP54920 295 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 NEK8Q86SG6 692 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 CRYGNQ8WXF5 182 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
CPSF7-202ENST00000394888 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
CPSF7-202ENST00000394888 HERVK_113P62684 666 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 LETM2Q2VYF4 491 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 CABP7Q86V35 215 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 AK8Q96MA6 479 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 EFCAB8A8MWE9 144 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 PLA2G4AP47712 749 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 NONOQ15233 471 aaKnown RBP eCLIP17.32■□□□□ 0.36
CPSF7-202ENST00000394888 MEA1Q16626 185 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 TFR2Q9UP52 801 aa17.32■□□□□ 0.36
CPSF7-202ENST00000394888 H7C1D1 291 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 TECP42680 631 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 ZNF543Q08ER8 600 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 CNNM4Q6P4Q7 775 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 GJA10Q969M2 543 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 GNG11P61952 73 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 JAG1P78504 1218 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 TMEM119Q4V9L6 283 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
CPSF7-202ENST00000394888 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 A0A1W2PQC6 194 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 RCCD1A6NED2 376 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 NPHP1O15259 732 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 TRIM37O94972 964 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 DPP8Q6V1X1 898 aaPredicted RBP17.31■□□□□ 0.36
CPSF7-202ENST00000394888 ADGRF4Q8IZF3 695 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
CPSF7-202ENST00000394888 URI1O94763 535 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms