RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 ABCB11O95342 1321 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 FAM205CA6NFA0 338 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 BTBD19C9JJ37 291 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 SLC10A3P09131 477 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 EARS2Q5JPH6 523 aaKnown RBP27.84■■■□□ 2.05
LRFN4-202ENST00000393952 CUL5Q93034 780 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 GBP4Q96PP9 640 aa27.84■■■□□ 2.05
LRFN4-202ENST00000393952 OPLAHO14841 1288 aa27.83■■■□□ 2.05
LRFN4-202ENST00000393952 OSBPP22059 807 aa27.83■■■□□ 2.05
LRFN4-202ENST00000393952 MYSM1Q5VVJ2 828 aa27.83■■■□□ 2.05
LRFN4-202ENST00000393952 POTEEQ6S8J3 1075 aa27.83■■■□□ 2.05
LRFN4-202ENST00000393952 BICD2Q8TD16 824 aa27.83■■■□□ 2.05
LRFN4-202ENST00000393952 MRPL12P52815 198 aaKnown RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 HERVK_113P62684 666 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 TMEM132BQ14DG7 1078 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 UBE2SQ16763 222 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 BIN2Q9UBW5 565 aaPredicted RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 ZNF214Q9UL59 606 aaPredicted RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 MRPL11Q9Y3B7 192 aaKnown RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 ALAS1P13196 640 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 ANKRD23Q86SG2 305 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 REXO1Q8N1G1 1221 aaKnown RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 TMEM260Q9NX78 707 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 TFIP11Q9UBB9 837 aaKnown RBP27.82■■■□□ 2.04
LRFN4-202ENST00000393952 CNPY2Q9Y2B0 182 aa27.82■■■□□ 2.04
LRFN4-202ENST00000393952 PDHXO00330 501 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 NCLP19338 710 aaKnown RBP27.81■■■□□ 2.04
LRFN4-202ENST00000393952 OAZ1P54368 228 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 JAKMIP3Q5VZ66 844 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 LBX2Q6XYB7 198 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 PIK3AP1Q6ZUJ8 805 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 GLT8D2Q9H1C3 349 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 PNMA2Q9UL42 364 aa27.81■■■□□ 2.04
LRFN4-202ENST00000393952 FAM155AB1AL88 458 aaPredicted RBP27.8■■■□□ 2.04
LRFN4-202ENST00000393952 PEX10O60683 326 aa27.8■■■□□ 2.04
LRFN4-202ENST00000393952 HHIPL1Q96JK4 782 aa27.8■■■□□ 2.04
LRFN4-202ENST00000393952 PTPN18Q99952 460 aa27.8■■■□□ 2.04
LRFN4-202ENST00000393952 PNMA3Q9UL41 463 aa27.8■■■□□ 2.04
LRFN4-202ENST00000393952 SLC45A1Q9Y2W3 748 aa27.8■■■□□ 2.04
LRFN4-202ENST00000393952 ATP2A1O14983 1001 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 SNRNP48Q6IEG0 339 aaKnown RBP27.79■■■□□ 2.04
LRFN4-202ENST00000393952 USP17L6PQ6QN14 398 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 FAM43AQ8N2R8 423 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 MB21D1Q8N884 522 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 CCDC102AQ96A19 550 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 ZNF396Q96N95 335 aaPredicted RBP27.79■■■□□ 2.04
LRFN4-202ENST00000393952 USP28Q96RU2 1077 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 FTOQ9C0B1 505 aaKnown RBP eCLIP27.79■■■□□ 2.04
LRFN4-202ENST00000393952 HOMER2Q9NSB8 354 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 BTBD7Q9P203 1132 aa27.79■■■□□ 2.04
LRFN4-202ENST00000393952 CCDC194A0A1B0GVG4 234 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 TESPA1A2RU30 521 aaPredicted RBP27.78■■■□□ 2.04
LRFN4-202ENST00000393952 MANSC4A6NHS7 340 aaPredicted RBP27.78■■■□□ 2.04
LRFN4-202ENST00000393952 MEIS2O14770 477 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 CLK2P49760 499 aaKnown RBP27.78■■■□□ 2.04
LRFN4-202ENST00000393952 KRT85P78386 507 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 CLEC4DQ8WXI8 215 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 TEX13BQ9BXU2 312 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 RIPK3Q9Y572 518 aa27.78■■■□□ 2.04
LRFN4-202ENST00000393952 CYP2C8P10632 490 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 TOB1P50616 345 aaPredicted RBP27.77■■■□□ 2.04
LRFN4-202ENST00000393952 PLS1Q14651 629 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 MUM1L1Q5H9M0 696 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 KRT25Q7Z3Z0 450 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 TBC1D5Q92609 795 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 PGBD1Q96JS3 809 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 GDPD2Q9HCC8 539 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 NFIBO00712 420 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 STAT3P40763 770 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 CEBPZQ03701 1054 aaKnown RBP27.77■■■□□ 2.04
LRFN4-202ENST00000393952 PAXIP1Q6ZW49 1069 aaPredicted RBP27.77■■■□□ 2.04
LRFN4-202ENST00000393952 TRERF1Q96PN7 1200 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 PAGR1Q9BTK6 254 aa27.77■■■□□ 2.04
LRFN4-202ENST00000393952 RBBP6Q7Z6E9 1792 aaKnown RBP27.77■■■□□ 2.04
LRFN4-202ENST00000393952 FIBPO43427 364 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 CNMDO75829 334 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 CFBP00751 764 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 ATP2B1P20020 1258 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 HOXA13P31271 388 aaPredicted RBP27.76■■■□□ 2.03
LRFN4-202ENST00000393952 APLP1P51693 650 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 RILPL1Q5EBL4 403 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 RNF146Q9NTX7 359 aa27.76■■■□□ 2.03
LRFN4-202ENST00000393952 MCM4P33991 863 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 NBR1Q14596 966 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 NONOQ15233 471 aaKnown RBP eCLIP27.75■■■□□ 2.03
LRFN4-202ENST00000393952 ATL3Q6DD88 541 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 CYP4F22Q6NT55 531 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 TXNRD2Q9NNW7 524 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 RBPJLQ9UBG7 517 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 NOL7Q9UMY1 257 aaKnown RBP27.75■■■□□ 2.03
LRFN4-202ENST00000393952 CLIC4Q9Y696 253 aa27.75■■■□□ 2.03
LRFN4-202ENST00000393952 GCOM1H8Y6P7 765 aaPredicted RBP27.74■■■□□ 2.03
LRFN4-202ENST00000393952 PIK3CDO00329 1044 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 POLR2MP0CAP2 368 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 GRM1Q13255 1194 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 INF2Q27J81 1249 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 CREBZFQ9NS37 354 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 CFAP45Q9UL16 551 aa27.74■■■□□ 2.03
LRFN4-202ENST00000393952 IGF2BP3O00425 579 aaKnown RBP eCLIP27.73■■■□□ 2.03
LRFN4-202ENST00000393952 WNT7AO00755 349 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms