RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TSPY8P0CW00 308 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 ADGRE1Q14246 886 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 CXCL17Q6UXB2 119 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 COL4A4P53420 1690 aaPredicted RBP18.28■□□□□ 0.52
CHMP3-202ENST00000393773 PATL2C9JE40 543 aaKnown RBP18.28■□□□□ 0.52
CHMP3-202ENST00000393773 APPP05067 770 aa18.28■□□□□ 0.52
CHMP3-202ENST00000393773 RAB30Q15771 203 aa18.28■□□□□ 0.52
CHMP3-202ENST00000393773 FSCN1Q16658 493 aaKnown RBP18.28■□□□□ 0.52
CHMP3-202ENST00000393773 FAM160B2Q86V87 743 aa18.28■□□□□ 0.52
CHMP3-202ENST00000393773 SEC62Q99442 399 aaKnown RBP18.28■□□□□ 0.52
CHMP3-202ENST00000393773 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
CHMP3-202ENST00000393773 WNT8AQ9H1J5 351 aa18.28■□□□□ 0.52
CHMP3-202ENST00000393773 HIPK3Q9H422 1215 aa18.28■□□□□ 0.52
CHMP3-202ENST00000393773 ASB14A6NK59 587 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 TNFRSF10AO00220 468 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 FOXP2O15409 715 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 CABYRO75952 493 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 SMPD1P17405 629 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 PDE4BQ07343 736 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 PPARAQ07869 468 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 FBXO16Q8IX29 292 aaPredicted RBP18.27■□□□□ 0.52
CHMP3-202ENST00000393773 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 VWCEQ96DN2 955 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 THEGQ9P2T0 379 aa18.27■□□□□ 0.52
CHMP3-202ENST00000393773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
CHMP3-202ENST00000393773 YBX2Q9Y2T7 364 aaKnown RBP18.27■□□□□ 0.52
CHMP3-202ENST00000393773 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
CHMP3-202ENST00000393773 B4GALT4O60513 344 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 PLA2G6O60733 806 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 SLC1A4P43007 532 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 TFAP4Q01664 338 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 ITGA7Q13683 1181 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 TMEM63BQ5T3F8 832 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 TAPT1Q6NXT6 567 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 ATXN2LQ8WWM7 1075 aaKnown RBP18.26■□□□□ 0.51
CHMP3-202ENST00000393773 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 NAPBQ9H115 298 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 NKX2-4Q9H2Z4 354 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 CYP39A1Q9NYL5 469 aa18.26■□□□□ 0.51
CHMP3-202ENST00000393773 ISY1Q9ULR0 285 aaKnown RBP18.26■□□□□ 0.51
CHMP3-202ENST00000393773 ALAS1P13196 640 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 MCCP23508 829 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 IKQ13123 557 aaPredicted RBP18.25■□□□□ 0.51
CHMP3-202ENST00000393773 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
CHMP3-202ENST00000393773 CHMP4CQ96CF2 233 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 NACAP1Q9BZK3 213 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 MTIF3Q9H2K0 278 aaKnown RBP18.25■□□□□ 0.51
CHMP3-202ENST00000393773 MSRAQ9UJ68 235 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 PRR12Q9ULL5 1215 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
CHMP3-202ENST00000393773 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 FGBP02675 491 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 CCL23P55773 120 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 SNAP25P60880 206 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 PSMC6P62333 389 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 MORC4Q8TE76 937 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 ASB2Q96Q27 587 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 SEZ6LQ9BYH1 1024 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 AP5M1Q9H0R1 490 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 IL17RBQ9NRM6 502 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 Q9Y3F1 56 aa18.24■□□□□ 0.51
CHMP3-202ENST00000393773 DYNC1LI2O43237 492 aaPredicted RBP18.23■□□□□ 0.51
CHMP3-202ENST00000393773 NMT2O60551 498 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 SLC3A2P08195 630 aaKnown RBP18.23■□□□□ 0.51
CHMP3-202ENST00000393773 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
CHMP3-202ENST00000393773 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 OTOP2Q7RTS6 562 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
CHMP3-202ENST00000393773 VTA1Q9NP79 307 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 STX8Q9UNK0 236 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 TET1Q8NFU7 2136 aa18.23■□□□□ 0.51
CHMP3-202ENST00000393773 PRRC2BQ5JSZ5 2229 aaKnown RBP18.22■□□□□ 0.51
CHMP3-202ENST00000393773 KIAA1217Q5T5P2 1943 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 NOVP48745 357 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 OTUD7AQ8TE49 926 aaPredicted RBP18.22■□□□□ 0.51
CHMP3-202ENST00000393773 ADAMTS19Q8TE59 1207 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
CHMP3-202ENST00000393773 SLC28A3Q9HAS3 691 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
CHMP3-202ENST00000393773 MYH6P13533 1939 aa18.21■□□□□ 0.51
CHMP3-202ENST00000393773 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.51
CHMP3-202ENST00000393773 ZEB2O60315 1214 aa18.21■□□□□ 0.51
CHMP3-202ENST00000393773 ICAM1P05362 532 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms