RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 BMP15O95972 392 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KLHL30Q0D2K2 578 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LRRC14Q15048 493 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FANCBQ8NB91 859 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LRRD1A4D1F6 860 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 GFPT1Q06210 699 aaPredicted RBP18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CCDC38Q502W7 563 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FAM47EQ6ZV65 393 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TRAPPC11Q7Z392 1133 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RNF217Q8TC41 542 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 NUP58Q9BVL2 599 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 UTP11Q9Y3A2 253 aaKnown RBP18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TET3O43151 1660 aa18.73■□□□□ 0.59
TRAF3IP1-202ENST00000391993 UBN2Q6ZU65 1347 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TBX2Q13207 712 aaPredicted RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 VPS36Q86VN1 386 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 IFT74Q96LB3 600 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 DDX47Q9H0S4 455 aaKnown RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 BICDL2A1A5D9 508 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PRKAB2O43741 272 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FNBP4Q8N3X1 1017 aaPredicted RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 NOP53Q9NZM5 478 aaKnown RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MYOM1P52179 1685 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RNF225M0QZC1 329 aaPredicted RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 POLR2FP61218 127 aaKnown RBP18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PIK3R5Q8WYR1 880 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SNX12Q9UMY4 172 aa18.72■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LGR5O75473 907 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ABCB4P21439 1286 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 KCNB1Q14721 858 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ZRSR2Q15696 482 aaKnown RBP18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PEX26Q7Z412 305 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SEC16BQ96JE7 1060 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CNNM2Q9H8M5 875 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CAPN6Q9Y6Q1 641 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PP2D1A8MPX8 630 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 RPS6KA5O75582 802 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 PLTPP55058 493 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 MUM1Q2TAK8 710 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SPDYE1Q8NFV5 336 aaPredicted RBP18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SDR42E1Q8WUS8 393 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 TRIM4Q9C037 500 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 NOD2Q9HC29 1040 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 ADAMTS1Q9UHI8 967 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 HPS5Q9UPZ3 1129 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FAM153BP0C7A2 387 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 LRRC41Q15345 812 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FAM153CQ494X1 144 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 DCAF17Q5H9S7 520 aaPredicted RBP18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 HPS3Q969F9 1004 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 HSD3B7Q9H2F3 369 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 FAM153AQ9UHL3 310 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 SH3TC1Q8TE82 1336 aa18.71■□□□□ 0.59
TRAF3IP1-202ENST00000391993 hCG_2014768A0A024R1R8 64 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 HMGB1P1B2RPK0 211 aaPredicted RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SNAP23O00161 211 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GTPBP6O43824 516 aaPredicted RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 VPS41P49754 854 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SMTNP53814 917 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CCDC26Q8TAB7 109 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GDAP1Q8TB36 358 aa18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DNAJC17Q9NVM6 304 aaKnown RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FBXO2Q9UK22 296 aaPredicted RBP18.71■□□□□ 0.58
TRAF3IP1-202ENST00000391993 KIF1BO60333 1816 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 HOXB7P09629 217 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZNF131P52739 623 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SCARF1Q14162 830 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PTPAQ15257 358 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TBC1D5Q92609 795 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.7■□□□□ 0.589e-13■■■■■ 192.3
TRAF3IP1-202ENST00000391993 COL3A1P02461 1466 aaPredicted RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PALMO75781 387 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ANTXR2P58335 489 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 AMPD3Q01432 767 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TTMPQ5BVD1 217 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 MB21D2Q8IYB1 491 aaPredicted RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 UBXN6Q9BZV1 441 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TARSL2A2RTX5 802 aaKnown RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 MMEP08473 750 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IRX1P78414 480 aaPredicted RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZBED6P86452 979 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZBTB16Q05516 673 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms