RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 HIBADHP31937 336 aaKnown RBP18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 SCYL3Q8IZE3 742 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 SAP30BPQ9UHR5 308 aaKnown RBP18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 SPECC1L-ADORA2AF8WAN1 911 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 ATP5HO75947 161 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 IFNAR2P48551 515 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 POLE2P56282 527 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 C6orf118Q5T5N4 469 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 SDCCAG3Q96C92 435 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 IL2RBP14784 551 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 PDCD7Q8N8D1 485 aaKnown RBP18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 ABCC12Q96J65 1359 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 CREB3O43889 395 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 ADCY2Q08462 1091 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 CCDC125Q86Z20 511 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 LINC00301Q8NCQ3 95 aa18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 NSUN7Q8NE18 718 aaKnown RBP18.66■□□□□ 0.58
COL4A3BP-203ENST00000380494 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 TEKT1Q969V4 418 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 SEMA3EO15041 775 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 PCP11498 1178 aaKnown RBP18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 FGFR1OP2Q9NVK5 253 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 NEK9Q8TD19 979 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 NDUFA10O95299 355 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 TTC4O95801 387 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 FMNL1O95466 1100 aaPredicted RBP18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 DHX9Q08211 1270 aaKnown RBP18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 TRIM11Q96F44 468 aa18.65■□□□□ 0.58
COL4A3BP-203ENST00000380494 SCG2P13521 617 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZBED6P86452 979 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 RPS6KA2Q15349 733 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 CHRNA2Q15822 529 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 ACRBPQ8NEB7 543 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 USP44Q9H0E7 712 aa18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 NHEJ1Q9H9Q4 299 aaPredicted RBP18.64■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZMYND10O75800 440 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 STAM2O75886 525 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 GOLGA8FQ08AF8 430 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 GOLGA8DPQ0D2H9 430 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 ADAM9Q13443 819 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 NXNQ6DKJ4 435 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 CHAMP1Q96JM3 812 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 AK8Q96MA6 479 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 ARHGEF10LQ9HCE6 1279 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 MAST3O60307 1309 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 MAN2A1Q16706 1144 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 EXOC3L4Q17RC7 722 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 P2RX5Q93086 422 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 TRIM6Q9C030 488 aaPredicted RBP18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 ECEL1O95672 775 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 CDKL2Q92772 493 aa18.64■□□□□ 0.57
COL4A3BP-203ENST00000380494 DEUP1Q05D60 604 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 BFSP1Q12934 665 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 DIXDC1Q155Q3 683 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 MAGOHBQ96A72 148 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 NOVA2Q9UNW9 492 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 DIS3Q9Y2L1 958 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 PRDM1O75626 825 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 DCTN3O75935 186 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 P4HA1P13674 534 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 NME8Q8N427 588 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 UHMK1Q8TAS1 419 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 EYA3Q99504 573 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 MAPK13O15264 365 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 RESTQ13127 1097 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 DTNBO60941 627 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 TAF5LO75529 589 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 IFNB1P01574 187 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 NEURL1BA8MQ27 555 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 BTBD18B2RXH4 712 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 INHBAP08476 426 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 TECP42680 631 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 EIF4A1P60842 406 aaKnown RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 PDCD2Q16342 344 aaPredicted RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 PPP1R2P3Q6NXS1 205 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 RUBCNQ92622 972 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 RNF34Q969K3 372 aa18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZNF594Q96JF6 807 aaPredicted RBP18.63■□□□□ 0.57
COL4A3BP-203ENST00000380494 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 HARSP12081 509 aaKnown RBP18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 TTLL7Q6ZT98 887 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 PCDHA13Q9Y5I0 950 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 SLFN14P0C7P3 912 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 PPM1FP49593 454 aaPredicted RBP18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 KMT5BQ4FZB7 885 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
COL4A3BP-203ENST00000380494 MIS12Q9H081 205 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms