RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CLEC10AQ8IUN9 316 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 LARP4BQ92615 738 aaKnown RBP19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 PXDNQ92626 1479 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L15C9J2P7 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L13C9JLJ4 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L11C9JVI0 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L18D6R9N7 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L22D6RA61 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L17D6RBQ6 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L19D6RCP7 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L20D6RJB6 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 ACTN2P35609 894 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L24Q0WX57 530 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L6PQ6QN14 398 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 CCDC50Q8IVM0 306 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 METTL13Q8N6R0 699 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 GOLGA1Q92805 767 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 CARD6Q9BX69 1037 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 RPAP1Q9BWH6 1393 aaPredicted RBP19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 TICAM2Q86XR7 235 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 MCF2L2Q86YR7 1114 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 TRIML1Q8N9V2 468 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 IFT81Q8WYA0 676 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 GSDMAQ96QA5 445 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 RIOK3O14730 519 aaKnown RBP19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 KIAA0754O94854 1291 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 GUCY1A2P33402 732 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 CCDC127Q96BQ5 260 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 SCAF8Q9UPN6 1271 aaKnown RBP19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 EXOC7Q9UPT5 735 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 NOD1Q9Y239 953 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 MKRN3Q13064 507 aaKnown RBP19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 TEKT3Q9BXF9 490 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 LARSQ9P2J5 1176 aaKnown RBP19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 SRPRBQ9Y5M8 271 aaKnown RBP19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 ASIC2Q16515 512 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 STAG2Q8N3U4 1231 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 ARMCX3Q9UH62 379 aaPredicted RBP19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 EVCP57679 992 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 TMEM179Q6ZVK1 233 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 JAKMIP2Q96AA8 810 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 NUP58Q9BVL2 599 aa19.91■□□□□ 0.78
PTPDC1-202ENST00000375360 XRCC5P13010 732 aaKnown RBP19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 EXOSC10Q01780 885 aaKnown RBP19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 SMC1AQ14683 1233 aaKnown RBP19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 TSC1Q92574 1164 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 ZBTB12Q9Y330 459 aaPredicted RBP19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 TNNI1P19237 187 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 CA8P35219 290 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 ADAM9Q13443 819 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 OR8K1Q8NGG5 319 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 ZNF577Q9BSK1 485 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 RABGAP1Q9Y3P9 1069 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 CEP83Q9Y592 693 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 AKR1B1P15121 316 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 TRPC3Q13507 836 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 TSGA10IPQ3SY00 556 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 SUPT20HL1Q3ZLR7 823 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 ODR4Q5SWX8 454 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 STK24Q9Y6E0 443 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 TUBB4AP04350 444 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 FAM107BQ9H098 131 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 SENP2Q9HC62 589 aa19.9■□□□□ 0.78
PTPDC1-202ENST00000375360 PNMA6FA0A0J9YX94 578 aa19.89■□□□□ 0.78
PTPDC1-202ENST00000375360 FSD2A1L4K1 749 aa19.89■□□□□ 0.78
PTPDC1-202ENST00000375360 USP17L10C9JJH3 530 aa19.89■□□□□ 0.78
PTPDC1-202ENST00000375360 EIF2AK2P19525 551 aaKnown RBP19.89■□□□□ 0.78
PTPDC1-202ENST00000375360 POLD4Q9HCU8 107 aa19.89■□□□□ 0.78
PTPDC1-202ENST00000375360 UTP14CQ5TAP6 766 aaKnown RBP19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 OTUD6AQ7L8S5 288 aa19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 SAMSN1Q9NSI8 373 aaKnown RBP19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 COL3A1P02461 1466 aaPredicted RBP19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 USP32Q8NFA0 1604 aa19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 BRDTQ58F21 947 aaPredicted RBP19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 COL4A3BPQ9Y5P4 624 aa19.89■□□□□ 0.77
PTPDC1-202ENST00000375360 K7ENM7 598 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 ASNSP08243 561 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 KRT19P08727 400 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 PLCG1P19174 1290 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 PTPROQ16827 1216 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 C12orf60Q5U649 245 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 MCTP2Q6DN12 878 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 DEPTORQ8TB45 409 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 MAN1B1Q9UKM7 699 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 TRPC6Q9Y210 931 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 ABCC12Q96J65 1359 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 PNPLA7Q6ZV29 1317 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 ATP1A3P13637 1013 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 SPOPO43791 374 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 MRFAP1L1Q96HT8 127 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 TRIM6Q9C030 488 aaPredicted RBP19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 DAGLAQ9Y4D2 1042 aa19.88■□□□□ 0.77
PTPDC1-202ENST00000375360 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 F5H6K3 240 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 KLRC3Q07444 240 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 PFKFB3Q16875 520 aaPredicted RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 VWA3BQ502W6 1294 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms