RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ATP6V1G2O95670 118 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 GLE1Q53GS7 698 aaKnown RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 TMED8Q6PL24 325 aaPredicted RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 CADPS2Q86UW7 1296 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 TBC1D10CQ8IV04 446 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 STAMBPL1Q96FJ0 436 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 SH3GL3Q99963 347 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 RBM12Q9NTZ6 932 aaKnown RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 AATFQ9NY61 560 aaKnown RBP eCLIP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 HMGB1P1B2RPK0 211 aaPredicted RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 BACH1O14867 736 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 CCDC181Q5TID7 509 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 CDCA2Q69YH5 1023 aaPredicted RBP22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 OXER1Q8TDS5 423 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 HOOK2Q96ED9 719 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 SEC16BQ96JE7 1060 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 CABP5Q9NP86 173 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 BAIAP2L1Q9UHR4 511 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 DCCP43146 1447 aa22.85■■□□□ 1.25
TMEFF1-201ENST00000374879 PARP4Q9UKK3 1724 aaKnown RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 PDE6BP35913 854 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 ELF3P78545 371 aaPredicted RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 BYSLQ13895 437 aaKnown RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 TOM1L2Q6ZVM7 507 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 IRF2BP1Q8IU81 584 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 FOXP1Q9H334 677 aaPredicted RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 MLXIPQ9HAP2 919 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 CEP131Q9UPN4 1083 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 FMNL1O95466 1100 aaPredicted RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 PARP1P09874 1014 aaKnown RBP22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 KCNB1Q14721 858 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 TRIM58Q8NG06 486 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 TJP1Q07157 1748 aa22.84■■□□□ 1.25
TMEFF1-201ENST00000374879 B4E1Z4 1266 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 MYO1EQ12965 1108 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 LACTB2Q53H82 288 aaPredicted RBP22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 KRT26Q7Z3Y9 468 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 IFT20Q8IY31 132 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 PARD3BQ8TEW8 1205 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 EPB41L5Q9HCM4 733 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 NUP188Q5SRE5 1749 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 ZNF263O14978 683 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 BUB1BO60566 1050 aaPredicted RBP22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 MOCS3O95396 460 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 ICA1Q05084 483 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 CCDC96Q2M329 555 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 CCDC82Q8N4S0 544 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 MICAL1Q8TDZ2 1067 aa22.83■■□□□ 1.25
TMEFF1-201ENST00000374879 MYH10P35580 1976 aa22.83■■□□□ 1.24
TMEFF1-201ENST00000374879 ERVV-2B6SEH9 535 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 TACC1O75410 805 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 PRLRP16471 622 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 MAATS1Q7Z4T9 603 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 ZNF507Q8TCN5 953 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 IGDCC4Q8TDY8 1250 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 CUL5Q93034 780 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 GDF3Q9NR23 364 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 BATF3Q9NR55 127 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 ETAA1Q9NY74 926 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 TRAPPC3O43617 180 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 CIAO1O76071 339 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 TMOD1P28289 359 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 GUCY2DQ02846 1103 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 HVCN1Q96D96 273 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 NUP58Q9BVL2 599 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 SLC39A2Q9NP94 309 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 CEP126Q9P2H0 1117 aa22.82■■□□□ 1.24
TMEFF1-201ENST00000374879 ENO4A6NNW6 628 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 LGALS16A8MUM7 142 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 GPAA1O43292 621 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 NCK2O43639 380 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 BZW1Q7L1Q6 419 aaKnown RBP22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 EBF2Q9HAK2 575 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 XDHP47989 1333 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 A0A1W2PQC6 194 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 TRIM49BA6NDI0 452 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 FAM205CA6NFA0 338 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 AP1G2O75843 785 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 NBPF9Q3BBW0 867 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 MSL1Q68DK7 614 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 HIBCHQ6NVY1 386 aaPredicted RBP22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 CCDC170Q8IYT3 715 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 ZBTB10Q96DT7 871 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 SAAL1Q96ER3 474 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 LY9Q9HBG7 655 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 ZNHIT6Q9NWK9 470 aaKnown RBP22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 PLAAQ9Y263 795 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 HYOU1Q9Y4L1 999 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 STK36Q9NRP7 1315 aa22.81■■□□□ 1.24
TMEFF1-201ENST00000374879 DNAJC8O75937 253 aaPredicted RBP22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 TCP1P17987 556 aaKnown RBP22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CDC25CP30307 473 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 PAFAH1B1P43034 410 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 KLK7P49862 253 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CACNA2D3Q8IZS8 1091 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 MREGQ8N565 214 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 C1orf131Q8NDD1 294 aaKnown RBP22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 CCDC26Q8TAB7 109 aa22.8■■□□□ 1.24
TMEFF1-201ENST00000374879 MS4A14Q96JA4 679 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms