RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 USP17L13C9JLJ4 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L11C9JVI0 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L18D6R9N7 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L22D6RA61 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L17D6RBQ6 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L19D6RCP7 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L20D6RJB6 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SEMA3EO15041 775 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L24Q0WX57 530 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PABPC4Q13310 644 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 UTP14CQ5TAP6 766 aaKnown RBP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L6PQ6QN14 398 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CCDC65Q8IXS2 484 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ZNF512BQ96KM6 892 aaPredicted RBP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 DDX25Q9UHL0 483 aaKnown RBP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 MYO6Q9UM54 1294 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CLRN2A0PK11 232 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 POTEB2H3BUK9 544 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TFRCP02786 760 aaKnown RBP19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PDE11AQ9HCR9 933 aa19.67■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TCP10L2B9ZVM9 353 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 FAM13AO94988 1023 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 KIF20AO95235 890 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TDP2O95551 362 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ATP2B4P23634 1241 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TC2NQ8N9U0 490 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TEKT1Q969V4 418 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SAR1BQ9Y6B6 198 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 A0A087X0B3 334 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 DNM2P50570 870 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 VPS36Q86VN1 386 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GPR161Q8N6U8 529 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SERPINB13Q9UIV8 391 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 HPSEQ9Y251 543 aa19.66■□□□□ 0.74
TRAF3IP1-201ENST00000373327 WNT7AO00755 349 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SORBS3O60504 671 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CKAP4Q07065 602 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TTBK2Q6IQ55 1244 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 RAD9BQ6WBX8 426 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 HDXQ7Z353 690 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TPH2Q8IWU9 490 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 OGFOD1Q8N543 542 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 KIFC2Q96AC6 838 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 RIC1Q4ADV7 1423 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TTC26A0AVF1 554 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 POLR2FP61218 127 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 C12orf60Q5U649 245 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 P2RX5Q93086 422 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 APBA3O96018 575 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PNMA6AP0CW24 399 aaPredicted RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TRAPPC10P48553 1259 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ATP2C1P98194 919 aaPredicted RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TRIM14Q14142 442 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 KLHL7Q8IXQ5 586 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ZNF579Q8NAF0 562 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 LARP4BQ92615 738 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TRIM31Q9BZY9 425 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 XRN1Q8IZH2 1706 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 BMP6P22004 513 aa19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 HOXA13P31271 388 aaPredicted RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 NAA15Q9BXJ9 866 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ZEB2O60315 1214 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 ECM2O94769 699 aaPredicted RBP19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 GCNT3O95395 438 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SF3B3Q15393 1217 aaKnown RBP19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 TBC1D22AQ8WUA7 517 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 LSM14BQ9BX40 385 aaKnown RBP19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 LRRC27Q9C0I9 530 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 CALCOCO1Q9P1Z2 691 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 PCP11498 1178 aaKnown RBP19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 KRT26Q7Z3Y9 468 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 TICAM2Q86XR7 235 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 RWDD2AQ9UIY3 292 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 ADGRG1Q9Y653 693 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 PHLPP2Q6ZVD8 1323 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 LONRF2Q1L5Z9 754 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 NYAP1Q6ZVC0 841 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SEPT12Q8IYM1 358 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 TXLNBQ8N3L3 684 aa19.64■□□□□ 0.73
TRAF3IP1-201ENST00000373327 RASSF7Q02833 373 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 PKN1Q16512 942 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 CERKLQ49MI3 558 aaPredicted RBP19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 NALCNQ8IZF0 1738 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SFI1A8K8P3 1242 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 NDUFA10O95299 355 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SEC23AQ15436 765 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 SLFN13Q68D06 897 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 MYOCDQ8IZQ8 938 aa19.63■□□□□ 0.73
TRAF3IP1-201ENST00000373327 PANK4Q9NVE7 773 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms