RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 COL6A3P12111 3177 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 TNKSO95271 1327 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 MYADML2A6NDP7 307 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 NFIBO00712 420 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 DUSP11O75319 330 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 ATN1P54259 1190 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 CCDC178Q5BJE1 867 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 GPATCH4Q5T3I0 446 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 CYB5R4Q7L1T6 521 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 IQCA1Q86XH1 822 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 FAM184BQ9ULE4 1060 aa21.12■□□□□ 0.97
TRAPPC3-202ENST00000373162 IRX5P78411 483 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 CCDC144BQ3MJ40 725 aa21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 PURBQ96QR8 312 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 TSEN34Q9BSV6 310 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 KRT23Q9C075 422 aa21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 CNNM2Q9H8M5 875 aa21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 ZHX1Q9UKY1 873 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 DDX49Q9Y6V7 483 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-202ENST00000373162 SOX1O00570 391 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-202ENST00000373162 GJA9P57773 515 aa21.1■□□□□ 0.97
TRAPPC3-202ENST00000373162 RNF180Q86T96 592 aa21.1■□□□□ 0.97
TRAPPC3-202ENST00000373162 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
TRAPPC3-202ENST00000373162 CPVLQ9H3G5 476 aa21.1■□□□□ 0.97
TRAPPC3-202ENST00000373162 A0A1W2PQ45 241 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 A0A1W2PQY0 241 aa21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 GOLGA8HP0CJ92 632 aa21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 TRIM60Q495X7 471 aa21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 STOX1Q6ZVD7 989 aa21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 GNEQ9Y223 722 aaKnown RBP21.09■□□□□ 0.97
TRAPPC3-202ENST00000373162 LOC102724159A0A0B4J2E5 919 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 ASB14A6NK59 587 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 BAATQ14032 418 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 PWP2Q15269 919 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 TAPT1Q6NXT6 567 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 SLC30A10Q6XR72 485 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 FERMT2Q96AC1 680 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 PDLIM7Q9NR12 457 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
TRAPPC3-202ENST00000373162 MOXD2PA6NHM9 499 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 EDNRBP24530 442 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 ACLYP53396 1101 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 NSMFQ6X4W1 530 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 UBA5Q9GZZ9 404 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 KAT14Q9H8E8 782 aa21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 U3KPZ7 1027 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC3-202ENST00000373162 ALDH5A1P51649 535 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-202ENST00000373162 RGS22Q8NE09 1264 aa21.06■□□□□ 0.96
TRAPPC3-202ENST00000373162 MTMR8Q96EF0 704 aa21.06■□□□□ 0.96
TRAPPC3-202ENST00000373162 ATP11BQ9Y2G3 1177 aa21.06■□□□□ 0.96
TRAPPC3-202ENST00000373162 ANTXR2P58335 489 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 TLE2Q04725 743 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 KCNA10Q16322 511 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 LRIT3Q3SXY7 679 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 TMEM63BQ5T3F8 832 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 ANKRD33Q7Z3H0 272 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 SH3RF1Q7Z6J0 888 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 SKAP1Q86WV1 359 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 ADGRF4Q8IZF3 695 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 TDHQ8IZJ6 230 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 MAF1Q9H063 256 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 JMJD4Q9H9V9 463 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 PDGFCQ9NRA1 345 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 MYH6P13533 1939 aa21.05■□□□□ 0.96
TRAPPC3-202ENST00000373162 RBM47A0AV96 593 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 TRIM43BA6NCK2 446 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 E7EWF7 191 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 SMPD1P17405 629 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 PTGS1P23219 599 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 CDK7P50613 346 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 RPS6P62753 249 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 MDM2Q00987 491 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 CDC37Q16543 378 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 MB21D2Q8IYB1 491 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 STAG2Q8N3U4 1231 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 TRIM43Q96BQ3 446 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 UBAC1Q9BSL1 405 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 VTA1Q9NP79 307 aa21.04■□□□□ 0.96
TRAPPC3-202ENST00000373162 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 MYCNP04198 464 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 ASGR1P07306 291 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 ITGB8P26012 769 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 GHRHRQ02643 423 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 IFIT1BQ5T764 474 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 CENPQQ7L2Z9 268 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 LRCH3Q96II8 777 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 TOX2Q96NM4 488 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 RBM8AQ9Y5S9 174 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 ELP1O95163 1332 aa21.03■□□□□ 0.96
TRAPPC3-202ENST00000373162 OPLAHO14841 1288 aa21.02■□□□□ 0.96
TRAPPC3-202ENST00000373162 KIAA0355O15063 1070 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms