RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CUL5Q93034 780 aa20.19■□□□□ 0.82
CTSA-204ENST00000372484 C16orf45Q96MC5 204 aaPredicted RBP20.19■□□□□ 0.82
CTSA-204ENST00000372484 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
CTSA-204ENST00000372484 INTS13Q9NVM9 706 aa20.19■□□□□ 0.82
CTSA-204ENST00000372484 TMOD2Q9NZR1 351 aa20.19■□□□□ 0.82
CTSA-204ENST00000372484 MRPL12P52815 198 aaKnown RBP20.18■□□□□ 0.82
CTSA-204ENST00000372484 TPD52L1Q16890 204 aaPredicted RBP20.18■□□□□ 0.82
CTSA-204ENST00000372484 SIAH1Q8IUQ4 282 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 PRIMPOLQ96LW4 560 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 PSMD14O00487 310 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 NRDCO43847 1150 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 UQCRHP07919 91 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 KCNA3P22001 575 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 TNNI2P48788 182 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 UBE2SQ16763 222 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 ZNF658Q5TYW1 1059 aaPredicted RBP20.18■□□□□ 0.82
CTSA-204ENST00000372484 CTNND2Q9UQB3 1225 aa20.18■□□□□ 0.82
CTSA-204ENST00000372484 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 CALCRLQ16602 461 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 PTPN21Q16825 1174 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
CTSA-204ENST00000372484 OGFOD1Q8N543 542 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 PSTPIP2Q9H939 334 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 COL2A1P02458 1487 aaPredicted RBP20.17■□□□□ 0.82
CTSA-204ENST00000372484 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 MYL1P05976 194 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
CTSA-204ENST00000372484 PLCG1P19174 1290 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 TXKP42681 527 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 CUEDC2Q9H467 287 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 KBTBD4Q9NVX7 518 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
CTSA-204ENST00000372484 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 F5H6K3 240 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 TDP2O95551 362 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 GH2P01242 217 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 CLK2P49760 499 aaKnown RBP20.16■□□□□ 0.82
CTSA-204ENST00000372484 KLRC3Q07444 240 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 IGSF22Q8N9C0 903 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 SLC16A10Q8TF71 515 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 MTMR9Q96QG7 549 aa20.16■□□□□ 0.82
CTSA-204ENST00000372484 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 SLC37A4O43826 429 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 DLGAP5Q15398 846 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 MAGEF1Q9HAY2 307 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 MYH7BA7E2Y1 1941 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 USP27XA6NNY8 438 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 EDIL3O43854 480 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 CDC37Q16543 378 aaPredicted RBP20.15■□□□□ 0.82
CTSA-204ENST00000372484 GMCL1P1Q8NEA9 526 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 GMLQ99445 158 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTSA-204ENST00000372484 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
CTSA-204ENST00000372484 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
CTSA-204ENST00000372484 PCDHA1Q9Y5I3 950 aa20.15■□□□□ 0.82
CTSA-204ENST00000372484 JAG1P78504 1218 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 PAK1Q13153 545 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 CDKAL1Q5VV42 579 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 LRRC15Q8TF66 581 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 RWDD2AQ9UIY3 292 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 GDAQ9Y2T3 454 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 COL4A5P29400 1685 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 A0A1B0GTH6 734 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 TNNT1P13805 278 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 KCNB1Q14721 858 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 PPP4R3AQ6IN85 833 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 CCAR2Q8N163 923 aaKnown RBP20.14■□□□□ 0.81
CTSA-204ENST00000372484 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 GMCL1Q96IK5 515 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 NUP88Q99567 741 aaPredicted RBP20.14■□□□□ 0.81
CTSA-204ENST00000372484 GLT8D2Q9H1C3 349 aa20.14■□□□□ 0.81
CTSA-204ENST00000372484 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
CTSA-204ENST00000372484 NDUFB10O96000 172 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 FXR2P51116 673 aaKnown RBP eCLIP20.13■□□□□ 0.81
CTSA-204ENST00000372484 IKQ13123 557 aaPredicted RBP20.13■□□□□ 0.81
CTSA-204ENST00000372484 RRP1BQ14684 758 aaKnown RBP20.13■□□□□ 0.81
CTSA-204ENST00000372484 NR1I3Q14994 352 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 NELFBQ8WX92 580 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 MMTAG2Q9BU76 263 aaKnown RBP20.13■□□□□ 0.81
CTSA-204ENST00000372484 RAB34Q9BZG1 259 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
CTSA-204ENST00000372484 LRWD1Q9UFC0 647 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 MAPK8IP1Q9UQF2 711 aa20.13■□□□□ 0.81
CTSA-204ENST00000372484 COBLO75128 1261 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 PRCPP42785 496 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 KMT5BQ4FZB7 885 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 CCDC112Q8NEF3 446 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 CTAGE1Q96RT6 745 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 KCND1Q9NSA2 647 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L15C9J2P7 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L13C9JLJ4 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L11C9JVI0 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L18D6R9N7 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L22D6RA61 530 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms