RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 HOMER2Q9NSB8 354 aa28.15■■■□□ 2.1
ALKAL1-201ENST00000358543 ABCB11O95342 1321 aa28.15■■■□□ 2.1
ALKAL1-201ENST00000358543 HOXC6P09630 235 aa28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 ADORA2AP29274 412 aa28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 RGS2P41220 211 aa28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 CCT2P78371 535 aaKnown RBP28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 CCDC82Q8N4S0 544 aa28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 RAET1EQ8TD07 263 aa28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 SEC63Q9UGP8 760 aaKnown RBP28.14■■■□□ 2.1
ALKAL1-201ENST00000358543 PLXNB2O15031 1838 aa28.13■■■□□ 2.09
ALKAL1-201ENST00000358543 PFKFB2O60825 505 aa28.13■■■□□ 2.09
ALKAL1-201ENST00000358543 CLEC4DQ8WXI8 215 aa28.13■■■□□ 2.09
ALKAL1-201ENST00000358543 MYH6P13533 1939 aa28.13■■■□□ 2.09
ALKAL1-201ENST00000358543 CNTNAP5Q8WYK1 1306 aa28.13■■■□□ 2.09
ALKAL1-201ENST00000358543 PPP1R11O60927 126 aaPredicted RBP28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 NTRK3Q16288 839 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 USH1GQ495M9 461 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 MUM1L1Q5H9M0 696 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 ANKRD35Q8N283 1001 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 RGS22Q8NE09 1264 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 PXYLP1Q8TE99 480 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 MCOLN1Q9GZU1 580 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 SLKQ9H2G2 1235 aaPredicted RBP28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 SLC5A4Q9NY91 659 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 MRPL11Q9Y3B7 192 aaKnown RBP28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 PTCH2Q9Y6C5 1203 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 ZNF236Q9UL36 1845 aa28.12■■■□□ 2.09
ALKAL1-201ENST00000358543 TAL1P17542 331 aaPredicted RBP28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 DPP9Q86TI2 863 aa28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 A1CFQ9NQ94 594 aaKnown RBP28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 LIMCH1Q9UPQ0 1083 aa28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 PCDHA1Q9Y5I3 950 aa28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 ZNFX1Q9P2E3 1918 aaKnown RBP28.11■■■□□ 2.09
ALKAL1-201ENST00000358543 DNAJC25-GNG10A0A024R161 153 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 ST18O60284 1047 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 IFNAR1P17181 557 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 CYP2B6P20813 491 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 ME3Q16798 604 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 TRMT44Q8IYL2 757 aaKnown RBP28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 PIBF1Q8WXW3 757 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 DDX11Q96FC9 970 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 APBA2Q99767 749 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 NCOA5Q9HCD5 579 aaKnown RBP28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 RBM27Q9P2N5 1060 aaKnown RBP28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 DIS3Q9Y2L1 958 aaKnown RBP28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 V9GY48 417 aaPredicted RBP28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 PFASO15067 1338 aa28.1■■■□□ 2.09
ALKAL1-201ENST00000358543 COBLO75128 1261 aa28.09■■■□□ 2.09
ALKAL1-201ENST00000358543 SCRN1Q12765 414 aa28.09■■■□□ 2.09
ALKAL1-201ENST00000358543 STK3Q13188 491 aa28.09■■■□□ 2.09
ALKAL1-201ENST00000358543 MCF2L2Q86YR7 1114 aa28.09■■■□□ 2.09
ALKAL1-201ENST00000358543 SLAIN1Q8ND83 568 aa28.09■■■□□ 2.09
ALKAL1-201ENST00000358543 NFIBO00712 420 aa28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 CPLX1O14810 134 aa28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 PRPF3O43395 683 aaKnown RBP28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 ADCY3O60266 1144 aa28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 ZNF792Q3KQV3 632 aa28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 CPLX2Q6PUV4 134 aaKnown RBP28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 CYP39A1Q9NYL5 469 aa28.08■■■□□ 2.09
ALKAL1-201ENST00000358543 PGK2P07205 417 aa28.07■■■□□ 2.08
ALKAL1-201ENST00000358543 NOL8Q76FK4 1167 aaKnown RBP28.07■■■□□ 2.08
ALKAL1-201ENST00000358543 SAMD3Q8N6K7 520 aa28.07■■■□□ 2.08
ALKAL1-201ENST00000358543 ZSCAN31Q96LW9 406 aaPredicted RBP28.07■■■□□ 2.08
ALKAL1-201ENST00000358543 RNF26Q9BY78 433 aaPredicted RBP28.07■■■□□ 2.08
ALKAL1-201ENST00000358543 GRK4P32298 578 aa28.06■■■□□ 2.08
ALKAL1-201ENST00000358543 GHRHRQ02643 423 aa28.06■■■□□ 2.08
ALKAL1-201ENST00000358543 NSMFQ6X4W1 530 aa28.06■■■□□ 2.08
ALKAL1-201ENST00000358543 NPLOC4Q8TAT6 608 aa28.06■■■□□ 2.08
ALKAL1-201ENST00000358543 MAP3K20Q9NYL2 800 aaKnown RBP28.06■■■□□ 2.08
ALKAL1-201ENST00000358543 hCG_1642624A0A1W2PR95 340 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 hCG_1984214I3L0E3 225 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 OLFML2BQ68BL8 750 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 RNF207Q6ZRF8 634 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 ZNF713Q8N859 430 aaPredicted RBP28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 FAM133AQ8N9E0 248 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 GTF3C6Q969F1 213 aa28.05■■■□□ 2.08
ALKAL1-201ENST00000358543 POTEB2H3BUK9 544 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 CDKL5O76039 1030 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 LARGE1O95461 756 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 IGHA2P01877 340 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 AKAP17AQ02040 695 aaKnown RBP28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 BAATQ14032 418 aaPredicted RBP28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 PFKFB3Q16875 520 aaPredicted RBP28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 SLC9C1Q4G0N8 1177 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 ZNF467Q7Z7K2 595 aaPredicted RBP28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 PHKBQ93100 1093 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 MAML3Q96JK9 1138 aa28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 SH2B1Q9NRF2 756 aaPredicted RBP28.04■■■□□ 2.08
ALKAL1-201ENST00000358543 OPLAHO14841 1288 aa28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 MCM2P49736 904 aa28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 RPS6P62753 249 aaKnown RBP28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 SSRP1Q08945 709 aaKnown RBP28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 TRIM22Q8IYM9 498 aa28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 MSL3Q8N5Y2 521 aaKnown RBP28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 TRIB2Q92519 343 aa28.03■■■□□ 2.08
ALKAL1-201ENST00000358543 PTPDC1A2A3K4 754 aa28.02■■■□□ 2.08
ALKAL1-201ENST00000358543 HMGCRP04035 888 aa28.02■■■□□ 2.08
ALKAL1-201ENST00000358543 ELNP15502 786 aa28.02■■■□□ 2.08
ALKAL1-201ENST00000358543 PKN1Q16512 942 aa28.02■■■□□ 2.08
ALKAL1-201ENST00000358543 CCL14Q16627 93 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms