RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FCER1AP12319 257 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 IL1R1P14778 569 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 ALDH1B1P30837 517 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 PPP1R18Q6NYC8 613 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 BICDL1Q6ZP65 573 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 TBC1D16Q8TBP0 767 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 INTS4Q96HW7 963 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 UBXN6Q9BZV1 441 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 TRIM5Q9C035 493 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 SHANK1Q9Y566 2161 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 KIAA1671Q9BY89 1806 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 PPP1R11O60927 126 aaPredicted RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 CASP5P51878 434 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 TROAPQ12815 778 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 C2CD6Q53TS8 623 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 MYSM1Q5VVJ2 828 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 CCDC102BQ68D86 513 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 CCAR1Q8IX12 1150 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 ZNF526Q8TF50 670 aaPredicted RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 ZNRF3Q9ULT6 936 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 IDH1O75874 414 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 CCT6AP40227 531 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 NBPF20Q3BBV1 942 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 BLOC1S2Q6QNY1 142 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 CERS5Q8N5B7 392 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 STRBPQ96SI9 672 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 DOCK7Q96N67 2140 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 POLR2DO15514 142 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 BBOX1O75936 387 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 AFMP43652 599 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 MMP14P50281 582 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 RNASE9P60153 205 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 FSIP1Q8NA03 581 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 ZBTB38Q8NAP3 1195 aaPredicted RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 NYXQ9GZU5 481 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
CD47-201ENST00000355354 EVPLQ92817 2033 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 IQCA1LA6NCM1 817 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 PDE6AP16499 860 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 KIAA1755Q5JYT7 1200 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 ABHD8Q96I13 439 aa6.51□□□□□ -1.37
CD47-201ENST00000355354 SDK2Q58EX2 2172 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 CROCCQ5TZA2 2017 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 FAM153BP0C7A2 387 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 ATP5JP18859 108 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 GMPRP36959 345 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 EIF6P56537 245 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 TERF2Q15554 542 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 AOC3Q16853 763 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 FAM153CQ494X1 144 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 MS4A14Q96JA4 679 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 PPP1R13BQ96KQ4 1090 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 MMTAG2Q9BU76 263 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 FUT8Q9BYC5 575 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 PAG1Q9NWQ8 432 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 FAM153AQ9UHL3 310 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 AKAP2Q9Y2D5 859 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 CT47B1P0C2W7 299 aaPredicted RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 RPS12P25398 132 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 CCT4P50991 539 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 DMTNQ08495 405 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 STK4Q13043 487 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 ANKS1BQ7Z6G8 1248 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 TSEN2Q8NCE0 465 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 COG1Q8WTW3 980 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 ZBTB10Q96DT7 871 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 MS4A4AQ96JQ5 239 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 NIP7Q9Y221 180 aaKnown RBP eCLIP6.5□□□□□ -1.37
CD47-201ENST00000355354 TEX15Q9BXT5 2789 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 TLR2O60603 784 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 ZNF18P17022 549 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 SLC7A5Q01650 507 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 CUL4BQ13620 913 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 RRP12Q5JTH9 1297 aaKnown RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 PRUNE1Q86TP1 453 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 SH3RF3Q8TEJ3 882 aaPredicted RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 TRIM44Q96DX7 344 aaPredicted RBP6.5□□□□□ -1.37
CD47-201ENST00000355354 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 STK31Q9BXU1 1019 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 CACNA1HO95180 2353 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 TP73O15350 636 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 POTEEQ6S8J3 1075 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 KIAA1468Q9P260 1216 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
CD47-201ENST00000355354 GLRX3O76003 335 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 CTGFP29279 349 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 DHX8Q14562 1220 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD47-201ENST00000355354 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 NCK2O43639 380 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 ME1P48163 572 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 DHX9Q08211 1270 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 NFIAQ12857 509 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 E2F4Q16254 413 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 TMEM63BQ5T3F8 832 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms