RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 FAM71BQ8TC56 605 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 APPBP2Q92624 585 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 CCDC51Q96ER9 411 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 ZNF496Q96IT1 587 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 CARD10Q9BWT7 1032 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 PDE11AQ9HCR9 933 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 NFE2L3Q9Y4A8 694 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 LY75O60449 1722 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 ECM29Q5VYK3 1845 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 A0A1B0GUL7 405 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 SH2B2O14492 632 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TRIM66O15016 1216 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 KIF5CO60282 957 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 DDNO94850 711 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ADH1CP00326 375 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MAGEA9P43362 315 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 GYS2P54840 703 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 HAND2P61296 217 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 KCNH2Q12809 1159 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 NNTQ13423 1086 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 RAD9BQ6WBX8 426 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 RASGRP2Q7LDG7 609 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 APTXQ7Z2E3 356 aaKnown RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 C10orf67Q8IYJ2 551 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 SPATA20Q8TB22 786 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 PNKPQ96T60 521 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 DESI2Q9BSY9 194 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ACBD3Q9H3P7 528 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MTMR10Q9NXD2 777 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 VPS18Q9P253 973 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ANGEL1Q9UNK9 670 aaKnown RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TJP1Q07157 1748 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ZNF213O14771 459 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TNNT3P45378 269 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 METAP2P50579 478 aaKnown RBP eCLIP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 FOXK2Q01167 660 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TRIM29Q14134 588 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MTF1Q14872 753 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 NTRK3Q16288 839 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 PTPN21Q16825 1174 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 SPATA1Q5VX52 437 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 HHIPL1Q96JK4 782 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 AIFM3Q96NN9 605 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MED15Q96RN5 788 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TEX13AQ9BXU3 409 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 YY1AP1Q9H869 796 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 ABCB6Q9NP58 842 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MED4Q9NPJ6 270 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 MYO1AQ9UBC5 1043 aa8.49□□□□□ -1.05
C11orf54-202ENST00000354421 FBXO2Q9UK22 296 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 TTF2Q9UNY4 1162 aaKnown RBP8.49□□□□□ -1.05
C11orf54-202ENST00000354421 NID2Q14112 1375 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 ITIH6Q6UXX5 1313 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 CTAGE9A4FU28 777 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 SOWAHDA6NJG2 315 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 PHKG2P15735 406 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 TRDNQ13061 729 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 LRRC24Q50LG9 513 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 WDR93Q6P2C0 686 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 FBXO46Q6PJ61 603 aaPredicted RBP8.48□□□□□ -1.05
C11orf54-202ENST00000354421 APOA5Q6Q788 366 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 RAB11FIP4Q86YS3 637 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
C11orf54-202ENST00000354421 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 SERTAD1Q9UHV2 236 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
C11orf54-202ENST00000354421 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
C11orf54-202ENST00000354421 CTAGE15A4D2H0 777 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 MFAP3LO75121 409 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CPP00450 1065 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CTAGE8P0CG41 777 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 IARSP41252 1262 aaKnown RBP8.47□□□□□ -1.05
C11orf54-202ENST00000354421 AARSP49588 968 aaKnown RBP eCLIP8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CORO7P57737 925 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 RBL2Q08999 1139 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 MCM6Q14566 821 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CASP8Q14790 479 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 KIF4BQ2VIQ3 1234 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 ZNF569Q5MCW4 686 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CDKAL1Q5VV42 579 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CST9Q5W186 159 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CYB5R4Q7L1T6 521 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms