RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KDM7AQ6ZMT4 941 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ATP11CQ8NB49 1132 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TCEANC2Q96MN5 208 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TRAIPQ9BWF2 469 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 OSBPL3Q9H4L5 887 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ATP6V0A2Q9Y487 856 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 IFIT3O14879 490 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 PRR29P0C7W0 189 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 MAGEA8P43361 318 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 SCTRP47872 440 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 IFNAR2P48551 515 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 NDUFA8P51970 172 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 PNOCQ13519 176 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ITIH4Q14624 930 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 LONRF3Q496Y0 759 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CFAP70Q5T0N1 1121 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TRPM8Q7Z2W7 1104 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 NEK9Q8TD19 979 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 RCOR1Q9UKL0 485 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ANKRD12Q6UB98 2062 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KCNJ18B7U540 433 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 H7C1D1 291 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ENC1O14682 589 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ZWINTO95229 277 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ATP6V1G2O95670 118 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 GCLCP48506 637 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 KCNJ12Q14500 433 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TMEM67Q5HYA8 995 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 BEND3Q5T5X7 828 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 STXBP4Q6ZWJ1 553 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CATIPQ7Z7H3 387 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 MICU3Q86XE3 530 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KCNV2Q8TDN2 545 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 PBKQ96KB5 322 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KRT12Q99456 494 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TRIM31Q9BZY9 425 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 MMADHCQ9H3L0 296 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 AMOTL2Q9Y2J4 779 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 PLXNC1O60486 1568 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 VAMP4O75379 141 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 NDUFA10O95299 355 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 GHRP10912 638 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 EEF1DP29692 281 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 VHLP40337 213 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 RBL2Q08999 1139 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 SULT6B1Q6IMI4 303 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TOGARAM2Q6ZUX3 1019 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CROCCP3Q8IVE0 287 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CATSPER1Q8NEC5 780 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CDC5LQ99459 802 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 FMO2Q99518 471 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 FERMT1Q9BQL6 677 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 POLR3EQ9NVU0 708 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 SCHIP1Q9P0W5 487 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 L1RE1Q9UN81 338 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CHMP2BQ9UQN3 213 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ZDHHC9Q9Y397 364 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ZNF330Q9Y3S2 320 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 SEMA3EO15041 775 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 GYG2O15488 501 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ADCY3O60266 1144 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 APOEP02649 317 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KCNA1Q09470 495 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ICA1LQ8NDH6 482 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 NGDNQ8NEJ9 315 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 RILPQ96NA2 401 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 NR1H4Q96RI1 486 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 NDEL1Q9GZM8 345 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 PCDHA7Q9UN72 937 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 H0Y3Z8 333 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 PTGISQ16647 500 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KRT80Q6KB66 452 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CNNM4Q6P4Q7 775 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ANO5Q75V66 913 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ARIH1Q9Y4X5 557 aaPredicted RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 ABCC5O15440 1437 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KCNK3O14649 394 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ARHGEF9O43307 516 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 TMTC3Q6ZXV5 915 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CSGALNACT2Q8N6G5 542 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 ENOX1Q8TC92 643 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 KIFAP3Q92845 792 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 VTI1AQ96AJ9 217 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 GID8Q9NWU2 228 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 KDM5AP29375 1690 aaKnown RBP5.49□□□□□ -1.53
SKP1-202ENST00000353411 GLI2P10070 1586 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 CLASP1Q7Z460 1538 aa5.49□□□□□ -1.53
SKP1-202ENST00000353411 RNASE9P60153 205 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 ARMCX5Q6P1M9 558 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 FERMT2Q96AC1 680 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 SUCLA2Q9P2R7 463 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 AMFRQ9UKV5 643 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TMCO1Q9UM00 188 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 NFU1Q9UMS0 254 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 RTN3O95197 1032 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 ATP4AP20648 1035 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 HSPA1LP34931 641 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms