RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PARP14Q460N5 1801 aa11.12□□□□□ -0.63
UBE2D3-205ENST00000350435 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 CLCN5P51795 746 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 NOL8Q76FK4 1167 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 METTL16Q86W50 562 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 RTKNQ9BST9 563 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
UBE2D3-205ENST00000350435 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 MICAL3Q7RTP6 2002 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 GRM8O00222 908 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 LDHCP07864 332 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 RRP1P56182 461 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 GNAI1P63096 354 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 FLIIQ13045 1269 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 BFSP2Q13515 415 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 UBALD2Q8IYN6 164 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 R4GN57 208 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 SPEGQ15772 3267 aa11.1□□□□□ -0.63
UBE2D3-205ENST00000350435 MYO10Q9HD67 2058 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 PRR5-ARHGAP8B1AHC4 643 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 LINC01565O15544 149 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 EFCAB14O75071 495 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ARHGAP8P85298 464 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 MECOMQ03112 1051 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ATF7IPQ6VMQ6 1270 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 SMRP1Q8NCR6 262 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ANGPTL2Q9UKU9 493 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
UBE2D3-205ENST00000350435 ABHD14A-ACY1A0A1B0GW23 586 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 FLOT1O75955 427 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 HLA-DOAP06340 250 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 GSTO1P78417 241 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 TNFAIP2Q03169 654 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 ADAM15Q13444 863 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 MTMR3Q13615 1198 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 TMEM132BQ14DG7 1078 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 ZC3H14Q6PJT7 736 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 TLK2Q86UE8 772 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 RIOX2Q8IUF8 465 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 CCDC105Q8IYK2 499 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 GPR161Q8N6U8 529 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 KREMEN2Q8NCW0 462 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 NOL10Q9BSC4 688 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 USP15Q9Y4E8 981 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 ZZEF1O43149 2961 aa11.08□□□□□ -0.64
UBE2D3-205ENST00000350435 GTF2F1P35269 517 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 COPB2P35606 906 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 PPM1JQ5JR12 505 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 FBXO11Q86XK2 927 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 TMEM192Q8IY95 271 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 LMAN2LQ9H0V9 348 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 CABP5Q9NP86 173 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 FRYQ5TBA9 3013 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 MYH1P12882 1939 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 ASTN1O14525 1302 aa11.07□□□□□ -0.64
UBE2D3-205ENST00000350435 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 PHKA1P46020 1223 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 COASYQ13057 564 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 IKBKEQ14164 716 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 FAM47CQ5HY64 1035 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 BEND3Q5T5X7 828 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 CCDC155Q8N6L0 562 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 DTWD2Q8NBA8 298 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 FLCNQ8NFG4 579 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 SH3RF3Q8TEJ3 882 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 PPP2R3CQ969Q6 453 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 SORCS3Q9UPU3 1222 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
UBE2D3-205ENST00000350435 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 HAX1O00165 279 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 DYNC1LI2O43237 492 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 PROS1P07225 676 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 ATF7P17544 494 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 STAT3P40763 770 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms