RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 SMPD1P17405 629 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 GMCL1P1Q8NEA9 526 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 ALDH8A1Q9H2A2 487 aaPredicted RBP18.81■□□□□ 0.6
COPE-202ENST00000349893 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
COPE-202ENST00000349893 A1CFQ9NQ94 594 aaKnown RBP18.81■□□□□ 0.6
COPE-202ENST00000349893 CTDP1Q9Y5B0 961 aaPredicted RBP18.81■□□□□ 0.6
COPE-202ENST00000349893 MUC6Q6W4X9 2439 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
COPE-202ENST00000349893 GPR37L1O60883 481 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 CA3P07451 260 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 SLC4A3P48751 1232 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 TTLL4Q14679 1199 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 TAPT1Q6NXT6 567 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 SCLYQ96I15 445 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 AP5M1Q9H0R1 490 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 C11orf16Q9NQ32 467 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
COPE-202ENST00000349893 ZNF536O15090 1300 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 EPOPA6NHQ4 379 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 TMEM31Q5JXX7 168 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 IQSEC1Q6DN90 963 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
COPE-202ENST00000349893 PHOSPHO2Q8TCD6 241 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
COPE-202ENST00000349893 MTMR4Q9NYA4 1195 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 PLIN4Q96Q06 1357 aa18.79■□□□□ 0.6
COPE-202ENST00000349893 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 GSG1L2A8MUP6 293 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 RFXAPO00287 272 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
COPE-202ENST00000349893 PTGS1P23219 599 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 PSMC6P62333 389 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 SKIV2LQ15477 1246 aaKnown RBP18.78■□□□□ 0.6
COPE-202ENST00000349893 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 CEP95Q96GE4 821 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 SLC9A7Q96T83 725 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 MKNK2Q9HBH9 465 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 HOMER2Q9NSB8 354 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 LCTP09848 1927 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 BRWD1Q9NSI6 2320 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 SCN5AQ14524 2016 aa18.78■□□□□ 0.6
COPE-202ENST00000349893 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 RAB11FIP3O75154 756 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 SUPT20HL2P0C7V6 817 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 TAP1Q03518 808 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
COPE-202ENST00000349893 TANC1Q9C0D5 1861 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 SCN10AQ9Y5Y9 1956 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 TTLL1O95922 423 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 BMP3P12645 472 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 RFC2P35250 354 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 HLA-CQ95604 372 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 TRMT13Q9NUP7 481 aaKnown RBP18.76■□□□□ 0.59
COPE-202ENST00000349893 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
COPE-202ENST00000349893 TNKSO95271 1327 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 LPXNO60711 386 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 PLA2G6O60733 806 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 ARHGEF15O94989 841 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 ACTN1P12814 892 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 STAT2P52630 851 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 KRT40Q6A162 431 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 FBXO16Q8IX29 292 aaPredicted RBP18.75■□□□□ 0.59
COPE-202ENST00000349893 KHSRPQ92945 711 aaKnown RBP eCLIP18.75■□□□□ 0.59
COPE-202ENST00000349893 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 CYP39A1Q9NYL5 469 aa18.75■□□□□ 0.59
COPE-202ENST00000349893 COL4A4P53420 1690 aaPredicted RBP18.74■□□□□ 0.59
COPE-202ENST00000349893 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 CYP2C9P11712 490 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 PURAQ00577 322 aaKnown RBP18.74■□□□□ 0.59
COPE-202ENST00000349893 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 FAM160B2Q86V87 743 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
COPE-202ENST00000349893 TRERF1Q96PN7 1200 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 CERS4Q9HA82 394 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 ZNF287Q9HBT7 754 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
COPE-202ENST00000349893 POLR3EQ9NVU0 708 aa18.74■□□□□ 0.59
COPE-202ENST00000349893 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
COPE-202ENST00000349893 TMEM232C9JQI7 657 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 PI4K2BG5E9Z4 385 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 HMMRO75330 724 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 DEFB128Q7Z7B8 93 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 HERC6Q8IVU3 1022 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
COPE-202ENST00000349893 NEDD1Q8NHV4 660 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 STAG1Q8WVM7 1258 aa18.73■□□□□ 0.59
COPE-202ENST00000349893 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
COPE-202ENST00000349893 MINDY4BA8MYZ0 360 aa18.72■□□□□ 0.59
COPE-202ENST00000349893 GRB10Q13322 594 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms