RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SERPINA10Q9UK55 444 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 MYH6P13533 1939 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 PPP4CP60510 307 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 SPON1Q9HCB6 807 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 SUGT1Q9Y2Z0 365 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 FOXN1O15353 648 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 CXCR5P32302 372 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 NR5A1Q13285 461 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 ACRBPQ8NEB7 543 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 LLPHQ9BRT6 129 aaKnown RBP11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 GOLGA6L10A0A0M3HER8 536 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 RHBDL3P58872 404 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 TERF2Q15554 542 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 PRM3Q9NNZ6 103 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 TRIM66O15016 1216 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 NLRP12P59046 1061 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 C12orf60Q5U649 245 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 CCDC42Q96M95 316 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 MAP9Q49MG5 647 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 UHMK1Q8TAS1 419 aaKnown RBP11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
CAPRIN1-201ENST00000341394 GUCY2FP51841 1108 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 NTRK3Q16288 839 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 SND1Q7KZF4 910 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■□□□ 12.8
CAPRIN1-201ENST00000341394 ENAHQ8N8S7 591 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 SHISA4Q96DD7 197 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 TCP10L2B9ZVM9 353 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 MTF1Q14872 753 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 SEC23AQ15436 765 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 LUC7L2Q9Y383 392 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 PCP11498 1178 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 ADAT2Q7Z6V5 191 aaKnown RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 ELP1O95163 1332 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 FLT1P17948 1338 aa11.68□□□□□ -0.54
CAPRIN1-201ENST00000341394 YDJCA8MPS7 323 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 PSMD14O00487 310 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 EBAG9O00559 213 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 USO1O60763 962 aaKnown RBP11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 LIFRP42702 1097 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 PLS1Q14651 629 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 DACT2Q5SW24 774 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 PAIP2Q9BPZ3 127 aaKnown RBP11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 NLRC4Q9NPP4 1024 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 CDK8P49336 464 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 HDXQ7Z353 690 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 FANCBQ8NB91 859 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 DPF2Q92785 391 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 KIF13BQ9NQT8 1826 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 TMEM110-MUSTN1A8MSY1 372 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 CASP14P31944 242 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 RESTQ13127 1097 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 POSTNQ15063 836 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 ADALQ6DHV7 355 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 HHIPL2Q6UWX4 724 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 LRRN4CLQ8ND94 238 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 SUGCTQ9HAC7 445 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 NDUFAB1O14561 156 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 BRCA1P38398 1863 aaKnown RBP11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 KIF5AQ12840 1032 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 SLC35F6Q8N357 371 aa11.67□□□□□ -0.54
CAPRIN1-201ENST00000341394 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 KIF28PB7ZC32 967 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SRGAP2O75044 1071 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 KCTD19Q17RG1 926 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 NBPF11Q86T75 865 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SGMS1Q86VZ5 419 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms