RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
SCARB1-202ENST00000339570 GUCY2FP51841 1108 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 KRT83P78385 493 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 MAP9Q49MG5 647 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 ERFEQ4G0M1 354 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 PNMA1Q8ND90 353 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 FAM76AQ8TAV0 307 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 RUFY1Q96T51 708 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 IFIH1Q9BYX4 1025 aaKnown RBP18■□□□□ 0.47
SCARB1-202ENST00000339570 TXNRD1Q16881 649 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 ITIH6Q6UXX5 1313 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 EXOC5O00471 708 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 MYH6P13533 1939 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 SEMA3EO15041 775 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 PSD3Q9NYI0 1048 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 MYH10P35580 1976 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 GNGT1P63211 74 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 RASSF7Q02833 373 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 TRIM14Q14142 442 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
SCARB1-202ENST00000339570 DCP1AQ9NPI6 582 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-202ENST00000339570 ZNF263O14978 683 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 EIF4A3P38919 411 aaKnown RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 PFKFB3Q16875 520 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 CABP7Q86V35 215 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 ZHX3Q9H4I2 956 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 BIN2Q9UBW5 565 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 CAPN11Q9UMQ6 739 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 GTF2A1P52655 376 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 NAPAP54920 295 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 PDCLQ13371 301 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 CCDC70Q6NSX1 233 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 GLIS3Q8NEA6 775 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 FAM84BQ96KN1 310 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 DUSP9Q99956 384 aaKnown RBP17.98■□□□□ 0.47
SCARB1-202ENST00000339570 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 MED4Q9NPJ6 270 aa17.98■□□□□ 0.47
SCARB1-202ENST00000339570 NUTM2BA6NNL0 878 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 NUTM2EB1AL46 878 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 PSMD14O00487 310 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 DNM2P50570 870 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 GFPT1Q06210 699 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 MYH13Q9UKX3 1938 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 KRT14P02533 472 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CALM1P0DP23 149 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CALM2P0DP24 149 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CALM3P0DP25 149 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CACNA2D4Q7Z3S7 1137 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 ARL8AQ96BM9 186 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CRNKL1Q9BZJ0 848 aaKnown RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 TCP11L1Q9NUJ3 509 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 ADAMTS2O95450 1211 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 FTCDO95954 541 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
SCARB1-202ENST00000339570 TXNRD3Q86VQ6 643 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 MYO1AQ9UBC5 1043 aa17.97■□□□□ 0.47
SCARB1-202ENST00000339570 AGPSO00116 658 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 LONP1P36776 959 aaKnown RBP17.96■□□□□ 0.47
SCARB1-202ENST00000339570 CKAP4Q07065 602 aaKnown RBP17.96■□□□□ 0.47
SCARB1-202ENST00000339570 MAPKAPK5Q8IW41 473 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 GOLPH3Q9H4A6 298 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
SCARB1-202ENST00000339570 PDE4CQ08493 712 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 TTI2Q6NXR4 508 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 WDR93Q6P2C0 686 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 GPATCH11Q8N954 259 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 P2RX5Q93086 422 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 DNAJC7Q99615 494 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 TMEM260Q9NX78 707 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
SCARB1-202ENST00000339570 TUBB2AQ13885 445 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 FBXW10Q5XX13 1052 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 USP17L2Q6R6M4 530 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 TSEN2Q8NCE0 465 aaKnown RBP17.95■□□□□ 0.46
SCARB1-202ENST00000339570 TUBB2BQ9BVA1 445 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 PCDHA4Q9UN74 947 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 KLRC4O43908 158 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 TACC1O75410 805 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 KIF5BP33176 963 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 ZNF507Q8TCN5 953 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 PCDHA6Q9UN73 950 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 PCDHA8Q9Y5H6 950 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 DDAH1O94760 285 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 TRADDQ15628 312 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 TGFBRAP1Q8WUH2 860 aa17.95■□□□□ 0.46
SCARB1-202ENST00000339570 SALL4Q9UJQ4 1053 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms