RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RBL2Q08999 1139 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 ANKS1AQ92625 1134 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 ZBTB9Q96C00 473 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 RHOXF2Q9BQY4 288 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 GBP3Q9H0R5 595 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 CSRNP2Q9H175 543 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 KCNQ5Q9NR82 932 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 CDK5RAP2Q96SN8 1893 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 PBX1P40424 430 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 ZNF174Q15697 407 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 STYK1Q6J9G0 422 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 LRRC31Q6UY01 552 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 NAV1Q8NEY1 1877 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 TMEM47Q9BQJ4 181 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 TTF2Q9UNY4 1162 aaKnown RBP21.09■□□□□ 0.97
PSPC1-201ENST00000338910 TUBBP07437 444 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 ERCC5P28715 1186 aaPredicted RBP21.09■□□□□ 0.97
PSPC1-201ENST00000338910 HSP90B2PQ58FF3 399 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 DEFB132Q7Z7B7 95 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 PACS2Q86VP3 889 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 IGSF22Q8N9C0 903 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 TNFRSF25Q93038 417 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 EYA3Q99504 573 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 ZNF287Q9HBT7 754 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 MED4Q9NPJ6 270 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 TCP11L1Q9NUJ3 509 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 SERTAD1Q9UHV2 236 aa21.09■□□□□ 0.97
PSPC1-201ENST00000338910 SLX4Q8IY92 1834 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 PICALMQ13492 652 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 C16orf86Q6ZW13 317 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 PPFIBP1Q86W92 1011 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 SLC35F6Q8N357 371 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 GPKOWQ92917 476 aaPredicted RBP eCLIP21.08■□□□□ 0.97
PSPC1-201ENST00000338910 CCDC102AQ96A19 550 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 YY1AP1Q9H869 796 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 MAD2L2Q9UI95 211 aa21.08■□□□□ 0.97
PSPC1-201ENST00000338910 SCNN1DP51172 638 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 CORO7P57737 925 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 WHAMMP3Q1A5X7 153 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 TTC31Q49AM3 519 aaPredicted RBP21.08■□□□□ 0.96
PSPC1-201ENST00000338910 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 PIK3AP1Q6ZUJ8 805 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 ZNF579Q8NAF0 562 aaKnown RBP21.08■□□□□ 0.96
PSPC1-201ENST00000338910 SPATA20Q8TB22 786 aa21.08■□□□□ 0.96
PSPC1-201ENST00000338910 CTAGE15A4D2H0 777 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 LRRIQ3A6PVS8 624 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-201ENST00000338910 MFAP3LO75121 409 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 CTAGE8P0CG41 777 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 GOLGA8HP0CJ92 632 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 GRM4Q14833 912 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 CTAGE6Q86UF2 777 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 CTAGE4Q8IX94 777 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 SUGT1Q9Y2Z0 365 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 FECHP22830 423 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 GRAMD1CQ8IYS0 662 aa21.07■□□□□ 0.96
PSPC1-201ENST00000338910 PHACTR2O75167 634 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 NT5C2P49902 561 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 NAPGQ99747 312 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-201ENST00000338910 ADD3Q9UEY8 706 aaKnown RBP21.06■□□□□ 0.96
PSPC1-201ENST00000338910 GTF2A1P52655 376 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-201ENST00000338910 SLC35G1Q2M3R5 365 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 TTC38Q5R3I4 469 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 WDR93Q6P2C0 686 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 CPLX3Q8WVH0 158 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 EPSTI1Q96J88 318 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 FAM204AQ9H8W3 233 aa21.06■□□□□ 0.96
PSPC1-201ENST00000338910 ACTN4O43707 911 aaKnown RBP21.05■□□□□ 0.96
PSPC1-201ENST00000338910 PODNQ7Z5L7 613 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 NOA1Q8NC60 698 aaKnown RBP21.05■□□□□ 0.96
PSPC1-201ENST00000338910 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 ACBD3Q9H3P7 528 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 CYTH3O43739 400 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 NEDD1Q8NHV4 660 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 CNKSR1Q969H4 720 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 JRKLQ9Y4A0 524 aa21.05■□□□□ 0.96
PSPC1-201ENST00000338910 ABL1P00519 1130 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 GNAQP50148 359 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 PTGDRQ13258 359 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 SPATA1Q5VX52 437 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 PPM1EQ8WY54 764 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 CASP14P31944 242 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 AARSP49588 968 aaKnown RBP eCLIP21.04■□□□□ 0.96
PSPC1-201ENST00000338910 AMPD2Q01433 879 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 SF3B2Q13435 895 aaKnown RBP21.04■□□□□ 0.96
PSPC1-201ENST00000338910 TYW1BQ6NUM6 668 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 CNGA4Q8IV77 575 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 ACRBPQ8NEB7 543 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 CCDC51Q96ER9 411 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 CEP95Q96GE4 821 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 VIPAS39Q9H9C1 493 aa21.04■□□□□ 0.96
PSPC1-201ENST00000338910 GYPCP04921 128 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 CT47A1Q5JQC4 288 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-201ENST00000338910 CDKAL1Q5VV42 579 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 KANK3Q6NY19 840 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 RASGRP4Q8TDF6 673 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 C7orf43Q8WVR3 580 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 MYO1AQ9UBC5 1043 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 MYH1P12882 1939 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-201ENST00000338910 KLRF2D3W0D1 207 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms