RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SCHIP1Q9P0W5 487 aaPredicted RBP9.46□□□□□ -0.89
TDP1-201ENST00000335725 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 SATB2Q9UPW6 733 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 IKBKGQ9Y6K9 419 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 C9orf84Q5VXU9 1444 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 ZNF132P52740 706 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 CDK17Q00537 523 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 BCL2A1Q16548 175 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 NEK10Q6ZWH5 1172 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 RUFY3Q7L099 469 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 FERMT3Q86UX7 667 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 SCUBE1Q8IWY4 988 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.89
TDP1-201ENST00000335725 SLC35F6Q8N357 371 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.89
TDP1-201ENST00000335725 TRPC4APQ8TEL6 797 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 TUBGCP5Q96RT8 1024 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 HAPLN3Q96S86 360 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 PRAG1Q86YV5 1406 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 TRPM1Q7Z4N2 1603 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 UPP2O95045 317 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 ATP8B2P98198 1209 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 SPIDRQ14159 915 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 COL19A1Q14993 1142 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 KCTD16Q68DU8 428 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
TDP1-201ENST00000335725 MLKLQ8NB16 471 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 PPP1R14CQ8TAE6 165 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 AZIN2Q96A70 460 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 HNRNPABQ99729 332 aaKnown RBP9.46□□□□□ -0.9
TDP1-201ENST00000335725 CENPKQ9BS16 269 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 CENPOQ9BU64 300 aa9.46□□□□□ -0.9
TDP1-201ENST00000335725 METTL14Q9HCE5 456 aaKnown RBP9.46□□□□□ -0.9
TDP1-201ENST00000335725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.9
TDP1-201ENST00000335725 TRAPPC3O43617 180 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 SERPINB4P48594 390 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 TUBP50607 506 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 PDCD4Q53EL6 469 aaKnown RBP9.45□□□□□ -0.9
TDP1-201ENST00000335725 MRPL44Q9H9J2 332 aaKnown RBP9.45□□□□□ -0.9
TDP1-201ENST00000335725 MTUS1Q9ULD2 1270 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 TSC22D4Q9Y3Q8 395 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 BICDL2A1A5D9 508 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 MAGEA13PA6NCF6 341 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ITGA2BP08514 1039 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ADARP55265 1226 aaKnown RBP9.45□□□□□ -0.9
TDP1-201ENST00000335725 NLRP12P59046 1061 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ITIH3Q06033 890 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 EPSTI1Q96J88 318 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.45□□□□□ -0.9
TDP1-201ENST00000335725 INTUQ9ULD6 942 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 KDM6AO15550 1401 aaPredicted RBP9.45□□□□□ -0.9
TDP1-201ENST00000335725 BBOX1O75936 387 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ASLP04424 464 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
TDP1-201ENST00000335725 ZNF131P52739 623 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ITIH4Q14624 930 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 SPRED3Q2MJR0 410 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 PHLDB2Q86SQ0 1253 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 CD302Q8IX05 232 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 FAM186BQ8IYM0 893 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 CCDC110Q8TBZ0 833 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 CDK5RAP3Q96JB5 506 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 OLFM3Q96PB7 478 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 INIPQ9NRY2 104 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ADGRG1Q9Y653 693 aa9.45□□□□□ -0.9
TDP1-201ENST00000335725 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 PLA2R1Q13018 1463 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 hCG_2014768A0A024R1R8 64 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 TRIM64CA6NLI5 447 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 EIF4E1BA6NMX2 242 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 IFIT3O14879 490 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 PEX14O75381 377 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 POTEJP0CG39 1038 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 PDCD7Q8N8D1 485 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 ATP6V1G3Q96LB4 118 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 TANGO6Q9C0B7 1094 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 FANCLQ9NW38 375 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 ADGBQ8N7X0 1667 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 DAPK1P53355 1430 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 TTC34A8MYJ7 566 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 SLC26A4O43511 780 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 LCA5LO95447 670 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 KRT14P02533 472 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 SKIP12755 728 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 GNAT2P19087 354 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 ATP8B4Q8TF62 1192 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 GPR101Q96P66 508 aaPredicted RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 TAF1DQ9H5J8 278 aaPredicted RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 EURLQ9NYK6 297 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 LRCH1Q9Y2L9 728 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms