RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 PPM1KQ8N3J5 372 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 TMEM247A6NEH6 219 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 DEPDC1BQ8WUY9 529 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 ADPGKQ9BRR6 497 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-201ENST00000331920 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
PTCH1-201ENST00000331920 FRMPD2Q68DX3 1309 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-201ENST00000331920 DESI2Q9BSY9 194 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 FBXO2Q9UK22 296 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-201ENST00000331920 IL9RQ01113 521 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 GPBP1Q86WP2 473 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 POLR2BP30876 1174 aaKnown RBP17.85■□□□□ 0.45
PTCH1-201ENST00000331920 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 GNPATO15228 680 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 DMP1Q13316 513 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-201ENST00000331920 TJAP1Q5JTD0 557 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 SPOPLQ6IQ16 392 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 TXLNGQ9NUQ3 528 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 E9PMD0 336 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 E2F6O75461 281 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 SLC7A5P2Q9GIP4 190 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 GOLGA5Q8TBA6 731 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 RPGRIP1Q96KN7 1286 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 TSR3Q9UJK0 312 aaKnown RBP17.85■□□□□ 0.45
PTCH1-201ENST00000331920 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-201ENST00000331920 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 NBNO60934 754 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 CCDC127Q96BQ5 260 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 KCNJ14Q9UNX9 436 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 KRT14P02533 472 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 ZNF75DP51815 510 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 ZNF654Q8IZM8 581 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 NFE2L3Q9Y4A8 694 aa17.85■□□□□ 0.45
PTCH1-201ENST00000331920 RNASELQ05823 741 aaKnown RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 CCDC90BQ9GZT6 254 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 WARS2Q9UGM6 360 aaKnown RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 GJC2Q5T442 439 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 FRA10AC1Q70Z53 315 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 ZBTB8OSQ8IWT0 167 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 LRRIQ4A6NIV6 560 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 TECP42680 631 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 SLC38A10Q9HBR0 1119 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 CFTRP13569 1480 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 GAPVD1Q14C86 1478 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 DDIT3P35638 169 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 KLHL29Q96CT2 875 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 INTS9Q9NV88 658 aaKnown RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 TRIML2Q8N7C3 387 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
PTCH1-201ENST00000331920 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-201ENST00000331920 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 TMEM191BP0C7N4 346 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 CARSP49589 748 aaKnown RBP17.83■□□□□ 0.45
PTCH1-201ENST00000331920 MECOMQ03112 1051 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 DDB1Q16531 1140 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 PANK4Q9NVE7 773 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 SMC5Q8IY18 1101 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 CENPKQ9BS16 269 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 HFM1A2PYH4 1435 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 GRAMD1BQ3KR37 738 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 IMPACTQ9P2X3 320 aa17.83■□□□□ 0.45
PTCH1-201ENST00000331920 GNA14O95837 355 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 RPS6KB1P23443 525 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 ZNF513Q8N8E2 541 aaPredicted RBP17.83■□□□□ 0.44
PTCH1-201ENST00000331920 TRIM58Q8NG06 486 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 SF3B3Q15393 1217 aaKnown RBP17.83■□□□□ 0.44
PTCH1-201ENST00000331920 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.44
PTCH1-201ENST00000331920 YY1AP1Q9H869 796 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 NPHP3Q7Z494 1330 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 BBS5Q8N3I7 341 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 VPS54Q9P1Q0 977 aa17.83■□□□□ 0.44
PTCH1-201ENST00000331920 EPHB1P54762 984 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 MESDQ14696 234 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 CYP4F22Q6NT55 531 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 GUCY2DQ02846 1103 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 AKT3Q9Y243 479 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 hCG_2014768A0A024R1R8 64 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 TAF11Q15544 211 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 CUTAO60888 179 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 EFCAB14O75071 495 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
PTCH1-201ENST00000331920 HSPA8P11142 646 aaKnown RBP17.82■□□□□ 0.44
PTCH1-201ENST00000331920 PTPREP23469 700 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 C1orf228Q6PIY5 440 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 DYDC2Q96IM9 177 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
PTCH1-201ENST00000331920 TEX12Q9BXU0 123 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 ING2Q9H160 280 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 TLK1Q9UKI8 766 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms