RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CETN3O15182 167 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 MFAP3LO75121 409 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 CDC27P30260 824 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 RESP18Q5W5W9 173 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 PAXIP1Q6ZW49 1069 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-201ENST00000321442 LRRC45Q96CN5 670 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 GDAQ9Y2T3 454 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 PLCG2P16885 1265 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 TXNRD1Q16881 649 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 HOOK3Q86VS8 718 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 FRMPD2Q68DX3 1309 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-201ENST00000321442 POTEJP0CG39 1038 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CYP2D6P10635 497 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 TCP1P17987 556 aaKnown RBP18.15■□□□□ 0.5
SFXN1-201ENST00000321442 ASIC2Q16515 512 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 TBC1D10CQ8IV04 446 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
SFXN1-201ENST00000321442 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 PTPREP23469 700 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CTNNA1P35221 906 aaKnown RBP18.15■□□□□ 0.5
SFXN1-201ENST00000321442 USH1GQ495M9 461 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 SFMBT2Q5VUG0 894 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 PAGE5Q96GU1 130 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 PANX2Q96RD6 677 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 ADGRG1Q9Y653 693 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 NYAP1Q6ZVC0 841 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 CPVLQ9H3G5 476 aa18.15■□□□□ 0.5
SFXN1-201ENST00000321442 BIN2Q9UBW5 565 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-201ENST00000321442 FAM196BA6NMK8 535 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 TSGA10IPQ3SY00 556 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 RUFY4Q6ZNE9 571 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 PEX26Q7Z412 305 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
SFXN1-201ENST00000321442 IFT88Q13099 833 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 CCDC6Q16204 474 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 OXER1Q8TDS5 423 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 CNOT6LQ96LI5 555 aaKnown RBP18.14■□□□□ 0.49
SFXN1-201ENST00000321442 MTRF1LQ9UGC7 380 aaKnown RBP18.14■□□□□ 0.49
SFXN1-201ENST00000321442 PPP1R2P41236 205 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 NAA35Q5VZE5 725 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 DPH5Q9H2P9 285 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 HDAC6Q9UBN7 1215 aa18.14■□□□□ 0.49
SFXN1-201ENST00000321442 CYP2C19P33261 490 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 ZBTB21Q9ULJ3 1066 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 MECOMQ03112 1051 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 PPP1R7Q15435 360 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 STXBP4Q6ZWJ1 553 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 SPICE1Q8N0Z3 855 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 SLC44A5Q8NCS7 719 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 PNMA1Q8ND90 353 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 SMCO2A6NFE2 343 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 CLNS1AP54105 237 aaKnown RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 POLR2FP61218 127 aaKnown RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 CALCOCO2Q13137 446 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 METTL16Q86W50 562 aaKnown RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 MRRFQ96E11 262 aaKnown RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 RNF26Q9BY78 433 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-201ENST00000321442 EPB41L5Q9HCM4 733 aa18.13■□□□□ 0.49
SFXN1-201ENST00000321442 C21orf2O43822 256 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 KRT12Q99456 494 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 A6NNZ2 444 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 FAM13AO94988 1023 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 ABCB4P21439 1286 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 TUBB8Q3ZCM7 444 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 MYO1AQ9UBC5 1043 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 SCAF8Q9UPN6 1271 aaKnown RBP18.12■□□□□ 0.49
SFXN1-201ENST00000321442 UTP11Q9Y3A2 253 aaKnown RBP18.12■□□□□ 0.49
SFXN1-201ENST00000321442 PLCB3Q01970 1234 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 CALCRLQ16602 461 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 VSNL1P62760 191 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
SFXN1-201ENST00000321442 TNIP1Q15025 636 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 MRFAP1Q9Y605 127 aa18.12■□□□□ 0.49
SFXN1-201ENST00000321442 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 EIF3CLB5ME19 914 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 PPEF1O14829 653 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 REXO1Q8N1G1 1221 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 EIF3CQ99613 913 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 LSM14BQ9BX40 385 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 XDHP47989 1333 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 NMT2O60551 498 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms