RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MAGEC2Q9UBF1 373 aaPredicted RBP9.75□□□□□ -0.85
CLK1-201ENST00000321356 CNTNAP4Q9C0A0 1308 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 ANO9A1A5B4 782 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 B4DLN1 442 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 EIF3CLB5ME19 914 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 N4BP1O75113 896 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 ATP1A1P05023 1023 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 PLCG1P19174 1290 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 PPP1R2P41236 205 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.85
CLK1-201ENST00000321356 ZBED6P86452 979 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 CCDC122Q5T0U0 273 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 HEATR3Q7Z4Q2 680 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 TXNRD3Q86VQ6 643 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 DZIP1Q86YF9 867 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 CSGALNACT2Q8N6G5 542 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 GOLGA5Q8TBA6 731 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 P2RX5Q93086 422 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 DYNLL2Q96FJ2 89 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 ERGIC2Q96RQ1 377 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 EIF3CQ99613 913 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 C7orf25Q9BPX7 421 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 LZTS2Q9BRK4 669 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SPZ1Q9BXG8 430 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 NYXQ9GZU5 481 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 ZMYND12Q9H0C1 365 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 MED4Q9NPJ6 270 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SAR1BQ9Y6B6 198 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 A0A1W2PQJ5 194 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 BICDL2A1A5D9 508 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 TARSL2A2RTX5 802 aaKnown RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 USP17L3A6NCW0 530 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 USP17L4A6NCW7 530 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 RCCD1A6NED2 376 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 LRRIQ3A6PVS8 624 aaPredicted RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 ENC1O14682 589 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 KCNQ2O43526 872 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 KRT86O43790 486 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 RPS6KA5O75582 802 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 OR52Z1P0C646 297 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 CYLC1P35663 651 aaPredicted RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 LMAN1P49257 510 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 PPP4CP60510 307 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 IRX5P78411 483 aaPredicted RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 RAD51AP2Q09MP3 1159 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 MIIPQ5JXC2 388 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 USP17L1Q7RTZ2 530 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 KRT25Q7Z3Z0 450 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 CABP7Q86V35 215 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 FAM71BQ8TC56 605 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SH3RF3Q8TEJ3 882 aaPredicted RBP9.74□□□□□ -0.85
CLK1-201ENST00000321356 JAKMIP2Q96AA8 810 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 NLRP3Q96P20 1036 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 MMS19Q96T76 1030 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 LACRTQ9GZZ8 138 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 AGPAT5Q9NUQ2 364 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 VPS18Q9P253 973 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 HDAC6Q9UBN7 1215 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 FAN1Q9Y2M0 1017 aa9.74□□□□□ -0.85
CLK1-201ENST00000321356 SNED1Q8TER0 1413 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 TNRC6CQ9HCJ0 1690 aaKnown RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 CAPN2P17655 700 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 RASA1P20936 1047 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 MCM3P25205 808 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 TM4SF1P30408 202 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 HNRNPH3P31942 346 aaKnown RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 ACTN2P35609 894 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 CKAP4Q07065 602 aaKnown RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 TBC1D8BQ0IIM8 1120 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 STK4Q13043 487 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 ORC2Q13416 577 aaPredicted RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 ANKRD40Q6AI12 368 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 BARGINQ6ZT62 677 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 IQCDQ96DY2 449 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 PLIN2Q99541 437 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 TMEM47Q9BQJ4 181 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 ACBD3Q9H3P7 528 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 NHEJ1Q9H9Q4 299 aaPredicted RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 TFR2Q9UP52 801 aa9.73□□□□□ -0.85
CLK1-201ENST00000321356 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
CLK1-201ENST00000321356 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
CLK1-201ENST00000321356 LDHBP07195 334 aaKnown RBP9.72□□□□□ -0.85
CLK1-201ENST00000321356 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 TRIM21P19474 475 aaKnown RBP9.72□□□□□ -0.85
CLK1-201ENST00000321356 PDE4DQ08499 809 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 NONOQ15233 471 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLK1-201ENST00000321356 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 KIAA1328Q86T90 577 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
CLK1-201ENST00000321356 CCDC47Q96A33 483 aaKnown RBP9.72□□□□□ -0.85
CLK1-201ENST00000321356 MMTAG2Q9BU76 263 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms