RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PAK2Q13177 524 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 SF3A3Q12874 501 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHANK1-201ENST00000293441 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 TFDP1Q14186 410 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 PALM2Q8IXS6 379 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
SHANK1-201ENST00000293441 I3L4J1 428 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 BBOX1O75936 387 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 MIGA2Q7L4E1 593 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 ABI1Q8IZP0 508 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 CTAGE3PQ8IX95 158 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 RASGRP4Q8TDF6 673 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 GJA10Q969M2 543 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 COPRSQ9NQ92 184 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 DISC1Q9NRI5 854 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 KCNK3O14649 394 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 DENND2CQ68D51 928 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 C4orf50Q6ZRC1 276 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 TACC3Q9Y6A5 838 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
SHANK1-201ENST00000293441 FOSP01100 380 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 ODR4Q5SWX8 454 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 IQCDQ96DY2 449 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 RIOK3O14730 519 aaKnown RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 GTPBP6O43824 516 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 KRT12Q99456 494 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 COBLO75128 1261 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 MYCP01106 439 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 LONP1P36776 959 aaKnown RBP18.97■□□□□ 0.63
SHANK1-201ENST00000293441 PSMD6Q15008 389 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 ELF2Q15723 593 aa18.97■□□□□ 0.63
SHANK1-201ENST00000293441 CCDC93Q567U6 631 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 MIS18BP1Q6P0N0 1132 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 MGARPQ8TDB4 240 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 BRD1O95696 1058 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 RUFY4Q6ZNE9 571 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 RAB17Q9H0T7 212 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 KIF11P52732 1056 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 KAZNQ674X7 775 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 KRBA2Q6ZNG9 492 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 NME8Q8N427 588 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 OR8K1Q8NGG5 319 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 NDUFA8P51970 172 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 NEDD9Q14511 834 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
SHANK1-201ENST00000293441 CCND2P30279 289 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 FAM26FQ5R3K3 315 aa18.96■□□□□ 0.63
SHANK1-201ENST00000293441 IGSF3O75054 1194 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ADAT2Q7Z6V5 191 aaKnown RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 GPR101Q96P66 508 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 PLCB1Q9NQ66 1216 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 KDM5CP41229 1560 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 VPS41P49754 854 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 STAT2P52630 851 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 SARNPP82979 210 aaKnown RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 MYL7Q01449 175 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 NLRP10Q86W26 655 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ARHGEF6Q15052 776 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ARHGEF5Q12774 1597 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 HNRNPDLO14979 420 aaKnown RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 PRKAB2O43741 272 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 CMA1P23946 247 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ATP11AP98196 1134 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 EEPD1Q7L9B9 569 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 TAB3Q8N5C8 712 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 PCDHA7Q9UN72 937 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 NUB1Q9Y5A7 615 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ZNF445P59923 1031 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 RSPH3Q86UC2 560 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ATP2A3Q93084 1043 aa18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ZNF277Q9NRM2 450 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-201ENST00000293441 ADD2P35612 726 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 CCDC62Q6P9F0 684 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 SEPT12Q8IYM1 358 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 LCORLQ8N3X6 602 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 LRFN2Q9ULH4 789 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 PCDHB4Q9Y5E5 795 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 RETREG2Q8NC44 543 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 EEF2KMTQ96G04 330 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 DESI2Q9BSY9 194 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 NDUFAB1O14561 156 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 OGFRQ9NZT2 677 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 KRIT1O00522 736 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 ADCY8P40145 1251 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 GUCY2FP51841 1108 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 ARHGEF2Q92974 986 aaKnown RBP18.94■□□□□ 0.62
SHANK1-201ENST00000293441 CCDC51Q96ER9 411 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms