RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ANKRD42Q8N9B4 389 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 IP6K1Q92551 441 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 GOLPH3Q9H4A6 298 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 RBBP5Q15291 538 aaKnown RBP17.98■□□□□ 0.47
GPC1-201ENST00000264039 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 CPP00450 1065 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 CAPRIN2Q6IMN6 1127 aaKnown RBP17.98■□□□□ 0.47
GPC1-201ENST00000264039 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
GPC1-201ENST00000264039 CCDC197Q8NCU1 140 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 SDR42E1Q8WUS8 393 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 HPS3Q969F9 1004 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 SGSM3Q96HU1 749 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 MED15Q96RN5 788 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
GPC1-201ENST00000264039 RCCD1A6NED2 376 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 FMNL1O95466 1100 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 PDHA1P08559 390 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 LACTBP83111 547 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 FERMT2Q96AC1 680 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 STAMBPL1Q96FJ0 436 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 PPP1R3GB7ZBB8 358 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 GTPBP6O43824 516 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 SMTNP53814 917 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 DPYDQ12882 1025 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 RPS6KA1Q15418 735 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 HEATR3Q7Z4Q2 680 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 ESR2Q92731 530 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 ACTR5Q9H9F9 607 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 DHX9Q08211 1270 aaKnown RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 CCDC6Q16204 474 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
GPC1-201ENST00000264039 VCPKMTQ9H867 229 aa17.97■□□□□ 0.47
GPC1-201ENST00000264039 A0A087X0B3 334 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 BMP15O95972 392 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 IFNAR1P17181 557 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 CYP7A1P22680 504 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 NUP58Q9BVL2 599 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 RNF41Q9H4P4 317 aaPredicted RBP17.96■□□□□ 0.47
GPC1-201ENST00000264039 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
GPC1-201ENST00000264039 TRAF5O00463 557 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 GLI1P08151 1106 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
GPC1-201ENST00000264039 KIF2BQ8N4N8 673 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 KLHL29Q96CT2 875 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 NEFHP12036 1026 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 PDE6AP16499 860 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 ZBED6P86452 979 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 LETM2Q2VYF4 491 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 GIGYF2Q6Y7W6 1299 aaKnown RBP17.96■□□□□ 0.47
GPC1-201ENST00000264039 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
GPC1-201ENST00000264039 LGALS16A8MUM7 142 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 KRIT1O00522 736 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 MXRA7P84157 204 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 AMPD2Q01433 879 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 ZNF658Q5TYW1 1059 aaPredicted RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 KIF6Q6ZMV9 814 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 SEC16BQ96JE7 1060 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 DDX47Q9H0S4 455 aaKnown RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 H0Y3Z8 333 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 FAM107AO95990 144 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 TRADDQ15628 312 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
GPC1-201ENST00000264039 ROBO2Q9HCK4 1378 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 PALMO75781 387 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 GSCP56915 257 aaPredicted RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 ATP11AP98196 1134 aa17.95■□□□□ 0.46
GPC1-201ENST00000264039 CRACR2BQ8N4Y2 399 aaPredicted RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 REXO2Q9Y3B8 237 aaKnown RBP17.95■□□□□ 0.46
GPC1-201ENST00000264039 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 HMGB1P1B2RPK0 211 aaPredicted RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 SSR1P43307 286 aaKnown RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 RBM28Q9NW13 759 aaKnown RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 ADAMTS1Q9UHI8 967 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 BICDL2A1A5D9 508 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 POLE2P56282 527 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 LRRC41Q15345 812 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 SLC9C1Q4G0N8 1177 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 FUKQ8N0W3 1084 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 TMTC2Q8N394 836 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 RNF217Q8TC41 542 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 NOD2Q9HC29 1040 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 TNKSO95271 1327 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 AP1G2O75843 785 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 CHRM1P11229 460 aaPredicted RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 PHKA1P46020 1223 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 POLR2FP61218 127 aaKnown RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 TAF11Q15544 211 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 OTUD6AQ7L8S5 288 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms