RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 P2RX5Q93086 422 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 GPR101Q96P66 508 aaPredicted RBP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 MLXIPQ9HAP2 919 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 TBC1D7Q9P0N9 293 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 TNS2Q63HR2 1409 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 MOCS3O95396 460 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 LDHBP07195 334 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 TUBBP07437 444 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 PLEKP08567 350 aaPredicted RBP18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 EPS15P42566 896 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 GNAQP50148 359 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 AMPD3Q01432 767 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 HNRNPLLQ8WVV9 542 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 REXO2Q9Y3B8 237 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 GOLGA6BA6NDN3 693 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 SMCO2A6NFE2 343 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 USP14P54578 494 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 HERVK_113P62684 666 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 STK4Q13043 487 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 LRRC41Q15345 812 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 NPY5RQ15761 445 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 ANKRD40Q6AI12 368 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
SNCAIP-202ENST00000261368 PTPROQ16827 1216 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 CCDC40Q4G0X9 1142 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 IFT81Q8WYA0 676 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 RAB21Q9UL25 225 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 AKAP11Q9UKA4 1901 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 USP17L2Q6R6M4 530 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 ALS2CR12Q96Q35 445 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 ATP8A2Q9NTI2 1148 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 GOLGA6CA6NDK9 693 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 OR52Z1P0C646 297 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 GOLGA6DP0CG33 693 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 GGCXP38435 758 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 FAM76AQ8TAV0 307 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 POLD4Q9HCU8 107 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 GOLGA6AQ9NYA3 693 aa18.03■□□□□ 0.48
SNCAIP-202ENST00000261368 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 MED4Q9NPJ6 270 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 CAPN11Q9UMQ6 739 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 MYH2Q9UKX2 1941 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 KCNQ2O43526 872 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 MAGEA1P43355 309 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 TNNI2P48788 182 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 IRF2BP1Q8IU81 584 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 TNFRSF25Q93038 417 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 C6orf50Q9HD87 102 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 MYH7P12883 1935 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 MYH8P13535 1937 aa18.02■□□□□ 0.48
SNCAIP-202ENST00000261368 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.47
SNCAIP-202ENST00000261368 THAP9Q9H5L6 903 aa18.02■□□□□ 0.47
SNCAIP-202ENST00000261368 BSDC1Q9NW68 430 aaPredicted RBP18.02■□□□□ 0.47
SNCAIP-202ENST00000261368 EHD2Q9NZN4 543 aa18.02■□□□□ 0.47
SNCAIP-202ENST00000261368 SV2BQ7L1I2 683 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 NUP58Q9BVL2 599 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 PCDHA6Q9UN73 950 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 PCDHA8Q9Y5H6 950 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 RCCD1A6NED2 376 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 BAG3O95817 575 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 CCNE1P24864 410 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 ZBED6P86452 979 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 SELENOOQ9BVL4 669 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 LAMB4A4D0S4 1761 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 NCK2O43639 380 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 EIF4A3P38919 411 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-202ENST00000261368 LRRC10BA6NIK2 292 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 SRP68Q9UHB9 627 aaKnown RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 FRMPD2Q68DX3 1309 aaPredicted RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 ZEB2O60315 1214 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 SRLQ86TD4 932 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 FAM107BQ9H098 131 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 BCL9O00512 1426 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 PCP11498 1178 aaKnown RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 RASSF7Q02833 373 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 TMEM266Q2M3C6 531 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 SPTY2D1Q68D10 685 aaPredicted RBP18■□□□□ 0.47
SNCAIP-202ENST00000261368 CNNM4Q6P4Q7 775 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 WDR59Q6PJI9 974 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 ZNF384Q8TF68 577 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 KANSL2Q9H9L4 492 aa18■□□□□ 0.47
SNCAIP-202ENST00000261368 ORC4O43929 436 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 PICALMQ13492 652 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 NAALADL2Q58DX5 795 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 MICALL1Q8N3F8 863 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 TBCKQ8TEA7 893 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms