RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 FTCDO95954 541 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 EEF1GP26641 437 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 EIF4A3P38919 411 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 GPBP1Q86WP2 473 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 KSR1Q8IVT5 923 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 BICD1Q96G01 975 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 KNDC1Q76NI1 1749 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 STK36Q9NRP7 1315 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 EPB41P11171 864 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ABCB4P21439 1286 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 MB21D1Q8N884 522 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 RPGRIP1Q96KN7 1286 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ATP8B1O43520 1251 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 DIXDC1Q155Q3 683 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ZYXQ15942 572 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PNMA8AQ86V59 439 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 NOA1Q8NC60 698 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 STAG1Q8WVM7 1258 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 LRRC45Q96CN5 670 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PPP1R1BQ9UD71 204 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 RTCBQ9Y3I0 505 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 RIPOR2Q9Y4F9 1068 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 A0A1W2PRG0 241 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PRPF3O43395 683 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PPP1R7Q15435 360 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 RDH13Q8NBN7 331 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 RASAL2Q9UJF2 1139 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 DIP2AQ14689 1571 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ZNF658Q5TYW1 1059 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ENAHQ8N8S7 591 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TRIM10Q9UDY6 481 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 KIAA1024Q9UPX6 916 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TTC26A0AVF1 554 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 SPOPO43791 374 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CLNS1AP54105 237 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 VSNL1P62760 191 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TRAPPC3LQ5T215 181 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC91Q7Z6B0 441 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 MYCT1Q8N699 235 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ABHD10Q9NUJ1 306 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PCDHA13Q9Y5I0 950 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ANKRD12Q6UB98 2062 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 DDAH1O94760 285 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 HEXIM1O94992 359 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC172P0C7W6 258 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 PRCPP42785 496 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 ZBED6P86452 979 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 FAM98CQ17RN3 349 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 GBP6Q6ZN66 633 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 BCAS4Q8TDM0 211 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 ATG3Q9NT62 314 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 USP40Q9NVE5 1235 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 CNBD1Q8NA66 436 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 NSRP1Q9H0G5 558 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 ARPP21Q9UBL0 812 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 TMEM94Q12767 1356 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 H2AFZP0C0S5 128 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 SLC1A4P43007 532 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 VPS41P49754 854 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 FXR1P51114 621 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 SMIM5Q71RC9 77 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 H2AFVQ71UI9 128 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 ILDR1Q86SU0 546 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 DAAM2Q86T65 1068 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 ZNF579Q8NAF0 562 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 POLD4Q9HCU8 107 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 MTUS1Q9ULD2 1270 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 PCDHB13Q9Y5F0 798 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 MYH13Q9UKX3 1938 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 MYO1AQ9UBC5 1043 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 PARP3Q9Y6F1 533 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 PALLDQ8WX93 1383 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 SP4Q02446 784 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 FAM26FQ5R3K3 315 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 CAPS2Q9BXY5 557 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 DNM3Q9UQ16 869 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 EZRP15311 586 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 NKIRAS1Q9NYS0 192 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 MTRF1LQ9UGC7 380 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 DDX25Q9UHL0 483 aaKnown RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 CCNL1Q9UK58 526 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-201ENST00000249837 LOC102724428A0A0B4J2F2 783 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 NF2P35240 595 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 SIK1P57059 783 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 EPB41L5Q9HCM4 733 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 UTYO14607 1347 aa5.09□□□□□ -1.59
VPS13C-201ENST00000249837 CD44P16070 742 aaKnown RBP5.09□□□□□ -1.6
VPS13C-201ENST00000249837 PPP1R2P41236 205 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 ZBTB16Q05516 673 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 IFT88Q13099 833 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 MAN2A1Q16706 1144 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 SLFN13Q68D06 897 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 IGDCC4Q8TDY8 1250 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 PANK4Q9NVE7 773 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 CCDC169A6NNP5 214 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 DDX39AO00148 427 aaKnown RBP5.09□□□□□ -1.6
VPS13C-201ENST00000249837 CALUO43852 315 aaPredicted RBP5.09□□□□□ -1.6
VPS13C-201ENST00000249837 CCNE1P24864 410 aa5.09□□□□□ -1.6
VPS13C-201ENST00000249837 NR1I3Q14994 352 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms