RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
CTSC-201ENST00000227266 CALML3P27482 149 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 VEGFBP49765 207 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 ADCY7P51828 1080 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 OAZ1P54368 228 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
CTSC-201ENST00000227266 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.37
CTSC-201ENST00000227266 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 ZMYND12Q9H0C1 365 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 PSTPIP2Q9H939 334 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 C6orf50Q9HD87 102 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 MRPL11Q9Y3B7 192 aaKnown RBP12.77□□□□□ -0.37
CTSC-201ENST00000227266 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 ABCB11O95342 1321 aa12.77□□□□□ -0.37
CTSC-201ENST00000227266 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 CNMDO75829 334 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 BRD1O95696 1058 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
CTSC-201ENST00000227266 GNA11P29992 359 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 KRT2P35908 639 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 TM4SF4P48230 202 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 PNMA2Q9UL42 364 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 PCDHA4Q9UN74 947 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 NR5A1Q13285 461 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 NPY5RQ15761 445 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 BLIDQ8IZY5 108 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
CTSC-201ENST00000227266 CUL5Q93034 780 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 SPATC1LQ9H0A9 340 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
CTSC-201ENST00000227266 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
CTSC-201ENST00000227266 ESYT2A0FGR8 921 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 OPLAHO14841 1288 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 GCLCP48506 637 aaPredicted RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 MRPL12P52815 198 aaKnown RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 UBE2SQ16763 222 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 MUM1L1Q5H9M0 696 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 GALNT17Q6IS24 598 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 RIC8AQ9NPQ8 531 aa12.75□□□□□ -0.37
CTSC-201ENST00000227266 BIN2Q9UBW5 565 aaPredicted RBP12.75□□□□□ -0.37
CTSC-201ENST00000227266 NFIBO00712 420 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 F13A1P00488 732 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 CFBP00751 764 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 HSPA6P17066 643 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 HOXA13P31271 388 aaPredicted RBP12.74□□□□□ -0.37
CTSC-201ENST00000227266 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 ERVK-24P63145 666 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 Q3C1V9 767 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 USP17L6PQ6QN14 398 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
CTSC-201ENST00000227266 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 BICD2Q8TD16 824 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
CTSC-201ENST00000227266 CPA4Q9UI42 421 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 PCNTO95613 3336 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 RESTQ13127 1097 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 WDR78Q5VTH9 848 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 JAKMIP3Q5VZ66 844 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 RIOX2Q8IUF8 465 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 NOSTRINQ8IVI9 506 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
CTSC-201ENST00000227266 GLT8D2Q9H1C3 349 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 FOXP1Q9H334 677 aaPredicted RBP12.74□□□□□ -0.37
CTSC-201ENST00000227266 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 TMEM260Q9NX78 707 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 RLFQ13129 1914 aa12.74□□□□□ -0.37
CTSC-201ENST00000227266 GCOM1H8Y6P7 765 aaPredicted RBP12.73□□□□□ -0.37
CTSC-201ENST00000227266 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 POLR2MP0CAP2 368 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 ERCC3P19447 782 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTSC-201ENST00000227266 MAP2K2P36507 400 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 CRHR2Q13324 411 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
CTSC-201ENST00000227266 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
CTSC-201ENST00000227266 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms