RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 DDX25Q9UHL0 483 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 FOSP01100 380 aaPredicted RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 DYNLL1P63167 89 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 PGBD1Q96JS3 809 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
NOD1-201ENST00000222823 HAUS4Q9H6D7 363 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 A6NNZ2 444 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 PPP6R2O75170 966 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 TUBB8Q3ZCM7 444 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 U2AF1L4Q8WU68 220 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 MRRFQ96E11 262 aaKnown RBP12.69□□□□□ -0.38
NOD1-201ENST00000222823 PRKAB2O43741 272 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 CLUL1Q15846 466 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 C11orf57Q6ZUT1 292 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 DEPTORQ8TB45 409 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 NRBP1Q9UHY1 535 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 PPP2R2CQ9Y2T4 447 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 IFNAR1P17181 557 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ABCB4P21439 1286 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 CYP4A11Q02928 519 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 RASA3Q14644 834 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 RNF34Q969K3 372 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 AMNQ9BXJ7 453 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 FOXO4P98177 505 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 PLA2G4DQ86XP0 818 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 RAB3IL1Q8TBN0 382 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 METTL14Q9HCE5 456 aaKnown RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 CSADQ9Y600 493 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 BBOX1O75936 387 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 KCNQ4P56696 695 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 KIF23Q02241 960 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 ADAM9Q13443 819 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 DCAF15Q66K64 600 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 SMAP1Q8IYB5 467 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 PIGBQ92521 554 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
NOD1-201ENST00000222823 ZNF215Q9UL58 517 aaPredicted RBP12.68□□□□□ -0.38
NOD1-201ENST00000222823 DAPK3O43293 454 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 GAS8O95995 478 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 B4GALNT4Q76KP1 1039 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 AS3MTQ9HBK9 375 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 STIM2Q9P246 746 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 SERPINB2P05120 415 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 PPFIA1Q13136 1202 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 TSC1Q92574 1164 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 KAZALD1Q96I82 304 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
NOD1-201ENST00000222823 SERPINB13Q9UIV8 391 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 EPN1Q9Y6I3 576 aaPredicted RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 MRPS9P82933 396 aaKnown RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 WHAMMP3Q1A5X7 153 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 LCORLQ8N3X6 602 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
NOD1-201ENST00000222823 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
NOD1-201ENST00000222823 ZNF609O15014 1411 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 NR5A1Q13285 461 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 IL17RAQ96F46 866 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
NOD1-201ENST00000222823 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms