RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MSL3Q8N5Y2 521 aaKnown RBP19.35■□□□□ 0.69
USB1-201ENST00000219281 LRRC15Q8TF66 581 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 EEF2KMTQ96G04 330 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 KBTBD4Q9NVX7 518 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 MAD2L2Q9UI95 211 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 TNRC6CQ9HCJ0 1690 aaKnown RBP19.35■□□□□ 0.69
USB1-201ENST00000219281 TULP2O00295 520 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 GRM4Q14833 912 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 TTI2Q6NXR4 508 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 QTRT2Q9H974 415 aaKnown RBP19.35■□□□□ 0.69
USB1-201ENST00000219281 AGPAT5Q9NUQ2 364 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 RNF216Q9NWF9 866 aaPredicted RBP19.35■□□□□ 0.69
USB1-201ENST00000219281 FAN1Q9Y2M0 1017 aa19.35■□□□□ 0.69
USB1-201ENST00000219281 SRGAP2O75044 1071 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 TUBBP07437 444 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 KLK7P49862 253 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 DNM2P50570 870 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 GRAPQ13588 217 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 PRR5LQ6MZQ0 368 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 CNBD1Q8NA66 436 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 GRAPLQ8TC17 118 aaPredicted RBP19.34■□□□□ 0.69
USB1-201ENST00000219281 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 DUSP9Q99956 384 aaKnown RBP19.34■□□□□ 0.69
USB1-201ENST00000219281 TUBGCP2Q9BSJ2 902 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 CCSER1Q9C0I3 900 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 USP17L3A6NCW0 530 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 USP17L4A6NCW7 530 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 SRGNP10124 158 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 RAD51AP2Q09MP3 1159 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 WDR93Q6P2C0 686 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 USP17L1Q7RTZ2 530 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 KIAA1328Q86T90 577 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 CSGALNACT2Q8N6G5 542 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 MMS19Q96T76 1030 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 EXOC1Q9NV70 894 aa19.34■□□□□ 0.69
USB1-201ENST00000219281 LRRIQ3A6PVS8 624 aaPredicted RBP19.33■□□□□ 0.68
USB1-201ENST00000219281 CYTH3O43739 400 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 MYL1P05976 194 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 GYS1P13807 737 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 KRT83P78385 493 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 C12orf60Q5U649 245 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 DZIP1Q86YF9 867 aaKnown RBP19.33■□□□□ 0.68
USB1-201ENST00000219281 SAR1BQ9Y6B6 198 aa19.33■□□□□ 0.68
USB1-201ENST00000219281 STXBP3O00186 592 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 ADRA2BP18089 450 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 TRIM21P19474 475 aaKnown RBP19.32■□□□□ 0.68
USB1-201ENST00000219281 GNAQP50148 359 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 USP14P54578 494 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 GOLGA5Q8TBA6 731 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 NOC3LQ8WTT2 800 aaKnown RBP19.32■□□□□ 0.68
USB1-201ENST00000219281 JAKMIP2Q96AA8 810 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 CAPZA3Q96KX2 299 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 LAMB1P07942 1786 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 CAPN2P17655 700 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 PLCG1P19174 1290 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 MEA1Q16626 185 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 DAGLBQ8NCG7 672 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 ANKS1AQ92625 1134 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 DHTKD1Q96HY7 919 aaPredicted RBP19.32■□□□□ 0.68
USB1-201ENST00000219281 ANKIB1Q9P2G1 1089 aa19.32■□□□□ 0.68
USB1-201ENST00000219281 RCCD1A6NED2 376 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 PHACTR2O75167 634 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 TBC1D8BQ0IIM8 1120 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 HSP90B2PQ58FF3 399 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
USB1-201ENST00000219281 CABP7Q86V35 215 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 TTYH3Q9C0H2 523 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 NHEJ1Q9H9Q4 299 aaPredicted RBP19.31■□□□□ 0.68
USB1-201ENST00000219281 ZNHIT6Q9NWK9 470 aaKnown RBP19.31■□□□□ 0.68
USB1-201ENST00000219281 BARHL2Q9NY43 387 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 KIAA1551Q9HCM1 1747 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 KRT86O43790 486 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 TSPY3P0CV98 308 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 TSPY8P0CW00 308 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 ACTN2P35609 894 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 CYLC1P35663 651 aaPredicted RBP19.31■□□□□ 0.68
USB1-201ENST00000219281 PDE4DQ08499 809 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 ANKRD40Q6AI12 368 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 P2RX5Q93086 422 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 PCMTD1Q96MG8 357 aaPredicted RBP19.31■□□□□ 0.68
USB1-201ENST00000219281 LACRTQ9GZZ8 138 aa19.31■□□□□ 0.68
USB1-201ENST00000219281 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 CCDC178Q5BJE1 867 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 GALNT17Q6IS24 598 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 FAM71BQ8TC56 605 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 SH3RF3Q8TEJ3 882 aaPredicted RBP19.3■□□□□ 0.68
USB1-201ENST00000219281 CNOT6LQ96LI5 555 aaKnown RBP19.3■□□□□ 0.68
USB1-201ENST00000219281 NUP58Q9BVL2 599 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 TCP11L1Q9NUJ3 509 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
USB1-201ENST00000219281 LAD1O00515 517 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 CCNE1P24864 410 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 PRPHP41219 470 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 STK4Q13043 487 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
USB1-201ENST00000219281 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms