RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 CCSER1Q9C0I3 900 aa19.52■□□□□ 0.71
RABGGTA-201ENST00000216840 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.71
RABGGTA-201ENST00000216840 DACH1Q9UI36 760 aa19.52■□□□□ 0.71
RABGGTA-201ENST00000216840 MYO1BO43795 1136 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 TBC1D12O60347 775 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 TNIP1Q15025 636 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 STAMQ92783 540 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 GSDMAQ96QA5 445 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 PSTPIP2Q9H939 334 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 MYOZ2Q9NPC6 264 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 DISC1Q9NRI5 854 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 CD2APQ9Y5K6 639 aa19.51■□□□□ 0.71
RABGGTA-201ENST00000216840 BMP3P12645 472 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 AK8Q96MA6 479 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 GTPBP6O43824 516 aaPredicted RBP19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 UBA7P41226 1012 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 STAT6P42226 847 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 XPO4Q9C0E2 1151 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 IFNKQ9P0W0 207 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 BCS1LQ9Y276 419 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 PCDHA1Q9Y5I3 950 aa19.5■□□□□ 0.71
RABGGTA-201ENST00000216840 TMEM232C9JQI7 657 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 ATP1A3P13637 1013 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 TNNI2P48788 182 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 NAALADL2Q58DX5 795 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 SYDE2Q5VT97 1194 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 BTNL9Q6UXG8 535 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 MTMR9Q96QG7 549 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 BLZF1Q9H2G9 400 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 ARHGEF10LQ9HCE6 1279 aa19.49■□□□□ 0.71
RABGGTA-201ENST00000216840 TDP2O95551 362 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 ECE1P42892 770 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 FANCCQ00597 558 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 RRAGBQ5VZM2 374 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 ACER1Q8TDN7 264 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 GLT8D2Q9H1C3 349 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 SLC37A4O43826 429 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 CUL4BQ13620 913 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 CT47A1Q5JQC4 288 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 MIGA2Q7L4E1 593 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 ENOX1Q8TC92 643 aaKnown RBP19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 MED15Q96RN5 788 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 TMX2Q9Y320 296 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 LTBP3Q9NS15 1303 aa19.48■□□□□ 0.71
RABGGTA-201ENST00000216840 ERCC5P28715 1186 aaPredicted RBP19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 MMP14P50281 582 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 SNAP25P60880 206 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 CALCRLQ16602 461 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 KIAA1755Q5JYT7 1200 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 PYCARDQ9ULZ3 195 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 RPS12P25398 132 aaKnown RBP19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 TECP42680 631 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 MAP3K10Q02779 954 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 IKQ13123 557 aaPredicted RBP19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 PPP4R3AQ6IN85 833 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 CABP7Q86V35 215 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 SPICE1Q8N0Z3 855 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 IGSF22Q8N9C0 903 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L15C9J2P7 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L13C9JLJ4 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L11C9JVI0 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L18D6R9N7 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 CD44P16070 742 aaKnown RBP19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 RASSF7Q02833 373 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 LRRC15Q8TF66 581 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
RABGGTA-201ENST00000216840 CAP2P40123 477 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 TXKP42681 527 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 PTGER2P43116 358 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 PRELPP51888 382 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 LRMPQ12912 555 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 FBXO11Q86XK2 927 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 TRMT44Q8IYL2 757 aaKnown RBP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 KIAA1524Q8TCG1 905 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 CACTINQ8WUQ7 758 aaKnown RBP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 PLIN2Q99541 437 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 GOPCQ9HD26 462 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 PPP1R3GB7ZBB8 358 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 EGFRP00533 1210 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 FXR2P51116 673 aaKnown RBP eCLIP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 C17orf53Q8N3J3 647 aaPredicted RBP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 MMTAG2Q9BU76 263 aaKnown RBP19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 PRR12Q9ULL5 1215 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 NFE2L3Q9Y4A8 694 aa19.45■□□□□ 0.7
RABGGTA-201ENST00000216840 OFD1O75665 1012 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms