RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Kcnk13Q8R1P5 405 aa16.46■□□□□ 0.23
Chd3-201ENSMUST00000092971 Trim60Q8VI40 466 aa16.46■□□□□ 0.23
Chd3-201ENSMUST00000092971 Ndc80Q9D0F1 642 aaKnown RBP16.46■□□□□ 0.23
Chd3-201ENSMUST00000092971 Styxl1Q9DAR2 321 aa16.46■□□□□ 0.23
Chd3-201ENSMUST00000092971 Surf1P09925 306 aa16.46■□□□□ 0.22
Chd3-201ENSMUST00000092971 Srrm1Q52KI8 946 aaKnown RBP16.46■□□□□ 0.22
Chd3-201ENSMUST00000092971 Atp2b4Q6Q477 1205 aa16.46■□□□□ 0.22
Chd3-201ENSMUST00000092971 Hacd3Q8K2C9 362 aa16.46■□□□□ 0.22
Chd3-201ENSMUST00000092971 Cfap52Q5F201 620 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Flot1O08917 428 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Alox15P39654 663 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Krt39Q6IFX4 482 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 4930504O13RikQ8C5Z9 145 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Riox2Q8CD15 465 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Utp11Q9CZJ1 253 aaKnown RBP16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 MefvQ9JJ26 767 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Psmg1Q9JK23 289 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Wdr91Q7TMQ7 748 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Fam180aQ8BR21 173 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm5936A2BG95 728 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm5640A3KG49 728 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Lca5Q80ST9 704 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Cdca7lQ922M5 438 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Sash1P59808 1230 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Trim38Q5SZ99 471 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Krt74Q6IFZ9 495 aa16.45■□□□□ 0.22
Chd3-201ENSMUST00000092971 Hcls1P49710 486 aaKnown RBP16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Smad1P70340 465 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Szrd1Q6NXN1 152 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Klhl29Q80T74 875 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 DexiQ9WUQ7 95 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 VdrP48281 422 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Cdc37Q61081 379 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 PapolaQ61183 739 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 MgarpQ8VI64 283 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ncoa5Q91W39 579 aaKnown RBP16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 AacsQ9D2R0 672 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Zyg11aA2BFL2 627 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ppp1r12bQ8BG95 976 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Agr3Q8R3W7 165 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Rhobtb1Q9DAK3 695 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Atp7aQ64430 1491 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 NficP70255 439 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Parp3Q3ULW8 533 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Luc7l3Q5SUF2 432 aaKnown RBP16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ccdc154Q6RUT8 657 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ccdc159Q8C963 411 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Aldh1l2Q8K009 923 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gimap7Q8R379 293 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Hoxc9P09633 260 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Mysm1Q69Z66 819 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Acap2Q6ZQK5 770 aa16.44■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm14525B1AZA0 212 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm2012B1B0R1 212 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ppfia4B8QI36 1187 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Fbxo41Q6NS60 873 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Etf1Q8BWY3 437 aaKnown RBP16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Rbm43Q99J64 343 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 CutaQ9CQ89 177 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 KynuQ9CXF0 464 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 1700013H16RikQ9DAC5 291 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Dbn1Q9QXS6 706 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ankrd50F7BE84 1390 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Aox4Q3TYQ9 1336 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Sycp3P70281 254 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ccdc33Q3ULW6 985 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Cage1Q5IR70 849 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Stxbp3Q60770 592 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Enox1Q8BHR2 643 aaKnown RBP16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Hdac11Q91WA3 347 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Fam167bP17257 162 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Pou5f1P20263 352 aaKnown RBP16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Eno3P21550 434 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Tmem132dQ76HP3 1097 aa16.43■□□□□ 0.22
Chd3-201ENSMUST00000092971 Tcp1P11983 556 aaKnown RBP16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Atg16l1Q8C0J2 607 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm7995L7N2E4 160 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Dnajc8Q6NZB0 253 aaKnown RBP16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Cspg5Q71M36 566 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Uap1Q91YN5 522 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Caln1Q9JJG7 219 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Rab20P35295 233 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ap1m1P35585 423 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Actn4P57780 912 aaKnown RBP16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 EsrrgP62509 458 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Fkbp3Q62446 224 aaKnown RBP16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Hdac4Q6NZM9 1076 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Osbpl2Q8BX94 484 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Proser2Q8C5R2 471 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Trim42Q9D2H5 723 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Pard3Q99NH2 1333 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Gm14685Q52KH6 695 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Meis1Q60954 390 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Skiv2lQ6NZR5 1244 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Fbxl5Q8C2S5 690 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Pcdhb12Q91Y07 789 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Ssfa2Q922B9 1252 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Tnip3A0A1D5RMN0 279 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 DffaO54786 331 aa16.42■□□□□ 0.22
Chd3-201ENSMUST00000092971 Rnf207Q3V3A7 635 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms