RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Ppm1hQ3UYC0 513 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ddx49Q4FZF3 480 aaKnown RBP5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Tdrd5Q5VCS6 1040 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ube2q1Q7TSS2 422 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Serinc5Q8BHJ6 461 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Trmt2aQ8BNV1 574 aaKnown RBP5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Pik3cbQ8BTI9 1064 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ube3dQ8BX13 368 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Vps37aQ8CHS8 397 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Unc5dQ8K1S2 956 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ttc30a1Q99J38 664 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ctnnbl1Q9CWL8 563 aaKnown RBP5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ttc30bQ9CY00 664 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 DgkeQ9R1C6 564 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Vps8Q0P5W1 1427 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Naip5Q9R016 1403 aa5.93□□□□□ -1.46
Clk1-201ENSMUST00000034868 Mia2Q91ZV0 1396 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Setbp1Q9Z180 1582 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Cdc27A2A6Q5 825 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Mmrn2A6H6E2 943 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Clip3B9EHT4 547 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Nucb1Q02819 459 aaKnown RBP5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gpr165Q3V3A3 455 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Lrig2Q52KR2 1054 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Pou4f3Q63955 338 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Crb2Q80YA8 1282 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Wdr3Q8BHB4 942 aaKnown RBP5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Mettl2Q8BMK1 389 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Atg14Q8CDJ3 492 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Cc2d1aQ8K1A6 943 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Il17rcQ8K4C2 698 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Tmem98Q91X86 226 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Prpf3Q922U1 683 aaKnown RBP5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 NgrnQ99KS2 293 aaKnown RBP5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Cadm3Q99N28 396 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Otud1Q9CUB6 454 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ppp1r3gQ9CW07 347 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ankef1Q9D2J7 775 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ccdc105Q9D4K7 499 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Apobec2Q9WV35 224 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Trip6Q9Z1Y4 480 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 Arhgef10Q8C033 1345 aa5.92□□□□□ -1.46
Clk1-201ENSMUST00000034868 3425401B19RikD3Z1D3 1412 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 A0A1W2P6Q8 802 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm9048A0A1W2P7H4 802 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 A0A1W2P7Z8 802 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm9046A0A1W2P855 802 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 MeiocA2AG06 965 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 MndalD0QMC3 538 aaKnown RBP5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm6588E9Q3K0 461 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Pdzd7E9Q9W7 1021 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Zfp850J3QPC5 689 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Cer1O55233 272 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 F10O88947 481 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Lin7bO88951 207 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Skap2Q3UND0 358 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Trim58Q5NCC9 485 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 PkdccQ5RJI4 492 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Satb1Q60611 764 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 SrlQ7TQ48 910 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gramd1bQ80TI0 738 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Tnpo1Q8BFY9 898 aaKnown RBP5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 ReltQ8BX43 436 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Nup133Q8R0G9 1155 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Cgref1Q8R1U2 281 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Q91V76 315 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 NpntQ91V88 561 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Klhdc4Q921I2 584 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Sh3bp5lQ99LH9 392 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Med4Q9CQA5 270 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Aldh1b1Q9CZS1 519 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Saal1Q9D2C2 474 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 FtmtQ9D5H4 237 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ccdc39Q9D5Y1 937 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Paip2Q9D6V8 124 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Strn3Q9ERG2 796 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 CenphQ9QYM8 241 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Dhx29Q6PGC1 1365 aaKnown RBP5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Lamc1P02468 1607 aaKnown RBP5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Kdm6bQ5NCY0 1641 aa5.91□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm2022A0A1Y7VLT7 144 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Rnf19bA2A7Q9 732 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ccdc74aE9Q9U8 364 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm2075J3QMW5 144 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gm6803J3QPI8 144 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Akap2O54931 893 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Atp2a2O55143 1044 aaKnown RBP5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Atp11aP98197 1187 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 HdxQ14B70 692 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 BB287469Q3UT53 144 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Gucy2cQ3UWA6 1072 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Afap1l2Q5DTU0 825 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Mfsd3Q5U419 412 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Usp7Q6A4J8 1103 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ppp1r9bQ6R891 817 aaKnown RBP5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ccdc155Q80VJ8 648 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 LarsQ8BMJ2 1178 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Mknk2Q8CDB0 459 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Calcoco1Q8CGU1 691 aa5.9□□□□□ -1.46
Clk1-201ENSMUST00000034868 Ssh3Q8K330 649 aa5.9□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms