RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 LEFTY1O75610 366 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 SSBP05455 408 aaKnown RBP eCLIP5.53□□□□□ -1.52
CASC19-278ENST00000642088 MCATQ8IVS2 390 aaKnown RBP5.53□□□□□ -1.52
CASC19-278ENST00000642088 PMFBP1Q8TBY8 1022 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 ATXN3LQ9H3M9 355 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 FAM86C1Q9NVL1 165 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 RRP7AQ9Y3A4 280 aaKnown RBP5.53□□□□□ -1.52
CASC19-278ENST00000642088 PTCH1Q13635 1447 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 PPIP5K1Q6PFW1 1433 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 ADAMTS13Q76LX8 1427 aa5.53□□□□□ -1.52
CASC19-278ENST00000642088 KLF4O43474 513 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 ANP32AP39687 249 aaKnown RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 TMEM201Q5SNT2 666 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 ARMCX6Q7L4S7 300 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 FAM20CQ8IXL6 584 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 TMEM40Q8WWA1 233 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 USP54Q70EL1 1684 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 METP08581 1390 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 COL3A1P02461 1466 aaPredicted RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 SART1O43290 800 aaKnown RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 UBOX5O94941 541 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 MAP4P27816 1152 aaKnown RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 MTHFSP49914 203 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 USP11P51784 963 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 EIF6P56537 245 aaKnown RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 SLFN5Q08AF3 891 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 ANKS3Q6ZW76 656 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
CASC19-278ENST00000642088 THEMISQ8N1K5 641 aaPredicted RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 BAHD1Q8TBE0 780 aaPredicted RBP5.52□□□□□ -1.53
CASC19-278ENST00000642088 PPP1R13LQ8WUF5 828 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 GATA6Q92908 595 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 LNPKQ9C0E8 428 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 KCNF1Q9H3M0 494 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 PIDD1Q9HB75 910 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 GMIPQ9P107 970 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 PIK3R4Q99570 1358 aa5.52□□□□□ -1.53
CASC19-278ENST00000642088 CPSF1Q10570 1443 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 VIRMAQ69YN4 1812 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 A0A1W2PQH9 124 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 MEIS3P2A8K0S8 358 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 GAS2O43903 313 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 BCAR3O75815 825 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 SLITRK5O94991 958 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 DOC2BQ14184 412 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 DUSP27Q5VZP5 1158 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 BEND4Q6ZU67 534 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 TTC6Q86TZ1 520 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 VPS37DQ86XT2 251 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 WDR63Q8IWG1 891 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 MRPL41Q8IXM3 137 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 TMEM192Q8IY95 271 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 FAM13CQ8NE31 585 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 EZH1Q92800 747 aaPredicted RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 TP53INP1Q96A56 240 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 ZNF512BQ96KM6 892 aaPredicted RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 NACC1Q96RE7 527 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 KIF2CQ99661 725 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 PIF1Q9H611 641 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 CDK12Q9NYV4 1490 aaPredicted RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 NME1P15531 152 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 RXRBP28702 533 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 PPP2R5EQ16537 467 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 NLRC3Q7RTR2 1065 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 HID1Q8IV36 788 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 TRMT2AQ8IZ69 625 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 CEP41Q9BYV8 373 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 CNNM2Q9H8M5 875 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
CASC19-278ENST00000642088 LAS1LQ9Y4W2 734 aaKnown RBP5.51□□□□□ -1.53
CASC19-278ENST00000642088 AATKQ6ZMQ8 1374 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 LRRC7Q96NW7 1537 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 FYB1O15117 783 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 RBL2Q08999 1139 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 COL9A2Q14055 689 aaPredicted RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 HP1BP3Q5SSJ5 553 aaPredicted RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 WAPLQ7Z5K2 1190 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 PPFIBP1Q86W92 1011 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 RBBP8NLQ8NC74 664 aaPredicted RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 IPO9Q96P70 1041 aaKnown RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 C7orf69Q9H7B7 122 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 SSU72Q9NP77 194 aaKnown RBP5.5□□□□□ -1.53
CASC19-278ENST00000642088 MAPK8IP3Q9UPT6 1336 aa5.5□□□□□ -1.53
CASC19-278ENST00000642088 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.49□□□□□ -1.53
CASC19-278ENST00000642088 C9IYK1 514 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
CASC19-278ENST00000642088 GATA4P43694 442 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 RGS3P49796 1198 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
CASC19-278ENST00000642088 NFKBIBQ15653 356 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 CDCP2Q5VXM1 449 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 TDRD10Q5VZ19 366 aaKnown RBP5.49□□□□□ -1.53
CASC19-278ENST00000642088 UNC5AQ6ZN44 842 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 DPH6Q7L8W6 267 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 SLFN12Q8IYM2 578 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 SPATA32Q96LK8 384 aa5.49□□□□□ -1.53
CASC19-278ENST00000642088 LGR4Q9BXB1 951 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms