RNA–Protein interactions for RNA: ENST00000638283.1

KCNMA1-231, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-231	ENST00000638283	FKBP1B	P68106	108 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SAPCD2	Q86UD0	394 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RBM46	Q8TBY0	533 aa	Known RBP	10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CHURC1	Q8WUH1	139 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	AGBL1	Q96MI9	1066 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RANBP17	Q9H2T7	1088 aa	Known RBP	10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RBM27	Q9P2N5	1060 aa	Known RBP	10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CNPY2	Q9Y2B0	182 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PCDHA1	Q9Y5I3	950 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CENPF	P49454	3210 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SMCHD1	A6NHR9	2005 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CATSPERG	Q6ZRH7	1159 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PRPF38A	Q8NAV1	312 aa	Known RBP	10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PPP1R9A	Q9ULJ8	1098 aa		10.24	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SMCO2	A6NFE2	343 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	WNT7A	O00755	349 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	OPLAH	O14841	1288 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PLA2G6	O60733	806 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	U2AF2	P26368	475 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CEBPZ	Q03701	1054 aa	Known RBP	10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CPXCR1	Q8N123	301 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TNFRSF25	Q93038	417 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	MS4A4A	Q96JQ5	239 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PTPRF	P10586	1907 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CXCL11	O14625	94 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	FAM160B2	Q86V87	743 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SMC1B	Q8NDV3	1235 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PGBD1	Q96JS3	809 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	ZMYND12	Q9H0C1	365 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RAVER2	Q9HCJ3	691 aa	Known RBP	10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TMEM260	Q9NX78	707 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283		M0R2N6	131 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	VWA5A	O00534	786 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	XBP1	P17861	261 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	NFKBIB	Q15653	356 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	UBE2S	Q16763	222 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	GPAT2	Q6NUI2	795 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	FBXO11	Q86XK2	927 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	NOSTRIN	Q8IVI9	506 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TBC1D5	Q92609	795 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SLC38A10	Q9HBR0	1119 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SH3GLB2	Q9NR46	395 aa		10.23	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TOMM70	O94826	608 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	NCL	P19338	710 aa	Known RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	KRT2	P35908	639 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	GNL2	Q13823	731 aa	Known RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TPRN	Q4KMQ1	711 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SPRYD7	Q5W111	196 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	P2RX7	Q99572	595 aa	Known RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	AMN	Q9BXJ7	453 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	BIN2	Q9UBW5	565 aa	Predicted RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PCDHA6	Q9UN73	950 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PCDHA4	Q9UN74	947 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PCDHA8	Q9Y5H6	950 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L15	C9J2P7	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L13	C9JLJ4	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L11	C9JVI0	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L18	D6R9N7	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L22	D6RA61	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L17	D6RBQ6	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L19	D6RCP7	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L20	D6RJB6	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TOB1	P50616	345 aa	Predicted RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L24	Q0WX57	530 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP17L6P	Q6QN14	398 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	BLID	Q8IZY5	108 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	USP28	Q96RU2	1077 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	HOMER2	Q9NSB8	354 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RIPK3	Q9Y572	518 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	RLF	Q13129	1914 aa		10.22	□□□□□ -0.77
KCNMA1-231	ENST00000638283	FIBP	O43427	364 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	ATP2B1	P20020	1258 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	DSG3	P32926	999 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	ZNF157	P51786	506 aa	Predicted RBP	10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SNAPC2	Q13487	334 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	COG2	Q14746	738 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	SAFB	Q15424	915 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	MYSM1	Q5VVJ2	828 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CLEC17A	Q6ZS10	378 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PIK3AP1	Q6ZUJ8	805 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	REPS2	Q8NFH8	660 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	BRI3BP	Q8WY22	251 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PTPN18	Q99952	460 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	FOXP1	Q9H334	677 aa	Predicted RBP	10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	R3HDML	Q9H3Y0	253 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	TMEM132B	Q14DG7	1078 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	JAKMIP3	Q5VZ66	844 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	AGTPBP1	Q9UPW5	1226 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CLIC4	Q9Y696	253 aa		10.21	□□□□□ -0.77
KCNMA1-231	ENST00000638283	CYP2C8	P10632	490 aa		10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	PDIA4	P13667	645 aa	Known RBP	10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	HOXA13	P31271	388 aa	Predicted RBP	10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	GLIPR1L2	Q4G1C9	344 aa		10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	RASAL3	Q86YV0	1011 aa		10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	CCDC148	Q8NFR7	591 aa		10.21	□□□□□ -0.78
KCNMA1-231	ENST00000638283	ZIC5	Q96T25	663 aa		10.21	□□□□□ -0.78

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