RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 IKBKBO14920 756 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 SPDYE6P0CI01 402 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 SHROOM1Q2M3G4 852 aaPredicted RBP22.37■■□□□ 1.17
TREX1-205ENST00000625293 KRT25Q7Z3Z0 450 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 ZSCAN29Q8IWY8 852 aaPredicted RBP22.37■■□□□ 1.17
TREX1-205ENST00000625293 MRFAP1L1Q96HT8 127 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 JMJD4Q9H9V9 463 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 GPCPD1Q9NPB8 672 aa22.37■■□□□ 1.17
TREX1-205ENST00000625293 TPM3P06753 285 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 BMP6P22004 513 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 INF2Q27J81 1249 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 SIAH1Q8IUQ4 282 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 MTMR8Q96EF0 704 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 KANSL2Q9H9L4 492 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 MAN1B1Q9UKM7 699 aa22.36■■□□□ 1.17
TREX1-205ENST00000625293 GOLGA6L6A8MZA4 724 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 E2F4Q16254 413 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 ISM2Q6H9L7 571 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 SPC24Q8NBT2 197 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 TTC12Q9H892 705 aaPredicted RBP22.35■■□□□ 1.17
TREX1-205ENST00000625293 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
TREX1-205ENST00000625293 LONP1P36776 959 aaKnown RBP22.35■■□□□ 1.17
TREX1-205ENST00000625293 TTBK2Q6IQ55 1244 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 PPP1R18Q6NYC8 613 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 TMEM179Q6ZVK1 233 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 GRAMD1CQ8IYS0 662 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 ADGRF4Q8IZF3 695 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 DHX58Q96C10 678 aa22.35■■□□□ 1.17
TREX1-205ENST00000625293 ZNF830Q96NB3 372 aaPredicted RBP22.35■■□□□ 1.17
TREX1-205ENST00000625293 ZBTB12Q9Y330 459 aaPredicted RBP22.35■■□□□ 1.17
TREX1-205ENST00000625293 PNMA6FA0A0J9YX94 578 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 SMTNL1A8MU46 457 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 MORC3Q14149 939 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 NONOQ15233 471 aaKnown RBP eCLIP22.34■■□□□ 1.17
TREX1-205ENST00000625293 GPC2Q8N158 579 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 TRIML1Q8N9V2 468 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 TMEM60Q9H2L4 133 aa22.34■■□□□ 1.17
TREX1-205ENST00000625293 MYH4Q9Y623 1939 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 LAD1O00515 517 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 PPP1R11O60927 126 aaPredicted RBP22.33■■□□□ 1.17
TREX1-205ENST00000625293 POTEIP0CG38 1075 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 POTEJP0CG39 1038 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 DCAF4Q8WV16 495 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 SMARCE1Q969G3 411 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 TRIM34Q9BYJ4 488 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 HSD3B7Q9H2F3 369 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 KCNF1Q9H3M0 494 aa22.33■■□□□ 1.17
TREX1-205ENST00000625293 SHTN1A0MZ66 631 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 ATP2B2Q01814 1243 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 SEPT2Q15019 361 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 CIAPIN1Q6FI81 312 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 COA7Q96BR5 231 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 PAGE5Q96GU1 130 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 HDAC9Q9UKV0 1011 aa22.33■■□□□ 1.16
TREX1-205ENST00000625293 PRPHP41219 470 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 EPS15P42566 896 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 CCDC96Q2M329 555 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 KCTD1Q719H9 257 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 REXO1Q8N1G1 1221 aaKnown RBP22.32■■□□□ 1.16
TREX1-205ENST00000625293 MTMR14Q8NCE2 650 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 CCDC34Q96HJ3 373 aa22.32■■□□□ 1.16
TREX1-205ENST00000625293 PYM1Q9BRP8 204 aaKnown RBP22.32■■□□□ 1.16
TREX1-205ENST00000625293 ZNF70Q9UC06 446 aaPredicted RBP22.32■■□□□ 1.16
TREX1-205ENST00000625293 JAG1P78504 1218 aa22.31■■□□□ 1.16
TREX1-205ENST00000625293 ICA1Q05084 483 aa22.31■■□□□ 1.16
TREX1-205ENST00000625293 ORC2Q13416 577 aaPredicted RBP22.31■■□□□ 1.16
TREX1-205ENST00000625293 RRP1BQ14684 758 aaKnown RBP22.31■■□□□ 1.16
TREX1-205ENST00000625293 ABCB5Q2M3G0 1257 aa22.31■■□□□ 1.16
TREX1-205ENST00000625293 SPDYE2Q495Y8 402 aa22.31■■□□□ 1.16
TREX1-205ENST00000625293 AGBL3Q8NEM8 1001 aa22.31■■□□□ 1.16
TREX1-205ENST00000625293 L3MBTL3Q96JM7 780 aaPredicted RBP22.31■■□□□ 1.16
TREX1-205ENST00000625293 WDR90Q96KV7 1748 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 GDF11O95390 407 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 ADCY7P51828 1080 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 MYL5Q02045 173 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 DPYDQ12882 1025 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 DLGAP5Q15398 846 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 PDXDC2PQ6P474 469 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 NEK8Q86SG6 692 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 FAM151AQ8WW52 585 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 CSRNP1Q96S65 589 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 TMOD2Q9NZR1 351 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
TREX1-205ENST00000625293 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 USP17L10C9JJH3 530 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 ZBTB5O15062 677 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 SLC16A2P36021 539 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 GMPSP49915 693 aaPredicted RBP22.3■■□□□ 1.16
TREX1-205ENST00000625293 FKBP1CQ5VVH2 108 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 SLFN13Q68D06 897 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 DTHD1Q6ZMT9 781 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 IQUBQ8NA54 791 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 MLKLQ8NB16 471 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
TREX1-205ENST00000625293 BIN2Q9UBW5 565 aaPredicted RBP22.3■■□□□ 1.16
TREX1-205ENST00000625293 SMC2O95347 1197 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 PTGS1P23219 599 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 CCDC186Q7Z3E2 898 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms