RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CDC25AP30304 524 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 STAMQ92783 540 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 SERPINA10Q9UK55 444 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 SIPA1L1O43166 1804 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 MYH4Q9Y623 1939 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 NPM3O75607 178 aaKnown RBP22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 CD44P16070 742 aaKnown RBP22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 NEK8Q86SG6 692 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 REXO1Q8N1G1 1221 aaKnown RBP22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 CCSER1Q9C0I3 900 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 DNAJC18Q9H819 358 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 INTS13Q9NVM9 706 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 PCDHAC2Q9Y5I4 1007 aa22.32■■□□□ 1.16
PCDHB11-202ENST00000624887 CDK11BP21127 795 aaKnown RBP22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 STAT6P42226 847 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 ORC2Q13416 577 aaPredicted RBP22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 KARSQ15046 597 aaKnown RBP22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 TPD52L1Q16890 204 aaPredicted RBP22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 LETM2Q2VYF4 491 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 SPATA1Q5VX52 437 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 CC2D2BQ6DHV5 1058 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 GPCPD1Q9NPB8 672 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 FAM198AQ9UFP1 575 aa22.31■■□□□ 1.16
PCDHB11-202ENST00000624887 PPP1R3GB7ZBB8 358 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 CCNT1O60563 726 aaKnown RBP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 RBM5P52756 815 aaKnown RBP eCLIP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 AOC3Q16853 763 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 GPATCH4Q5T3I0 446 aaKnown RBP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 C16orf45Q96MC5 204 aaPredicted RBP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 BLZF1Q9H2G9 400 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 SAMSN1Q9NSI8 373 aaKnown RBP22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 PI4KBQ9UBF8 816 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 TMEM232C9JQI7 657 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 OR52Z1P0C646 297 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 UBA7P41226 1012 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 CACNB3P54284 484 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 HSP90AA4PQ58FG1 418 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 TBCKQ8TEA7 893 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 AK8Q96MA6 479 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 JMJD4Q9H9V9 463 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 SYNRGQ9UMZ2 1314 aa22.3■■□□□ 1.16
PCDHB11-202ENST00000624887 PNMA6FA0A0J9YX94 578 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 DDTLA6NHG4 134 aaPredicted RBP22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 KCNJ6P48051 423 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 TCP10Q12799 353 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 RRAGBQ5VZM2 374 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 PPP1R18Q6NYC8 613 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 ADGRF4Q8IZF3 695 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 BIN2Q9UBW5 565 aaPredicted RBP22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 DYNC1I1O14576 645 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 NRDCO43847 1150 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 ADCY7P51828 1080 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 NAALADL2Q58DX5 795 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 JAKMIP3Q5VZ66 844 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 KLHL10Q6JEL2 608 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 SUPT20HQ8NEM7 779 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 COA7Q96BR5 231 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 RMND1Q9NWS8 449 aa22.29■■□□□ 1.16
PCDHB11-202ENST00000624887 PP2D1A8MPX8 630 aa22.28■■□□□ 1.16
PCDHB11-202ENST00000624887 SLURP2P0DP57 97 aa22.28■■□□□ 1.16
PCDHB11-202ENST00000624887 SH3BP5LQ7L8J4 393 aa22.28■■□□□ 1.16
PCDHB11-202ENST00000624887 SMYD4Q8IYR2 804 aaPredicted RBP22.28■■□□□ 1.16
PCDHB11-202ENST00000624887 CCAR2Q8N163 923 aaKnown RBP22.28■■□□□ 1.16
PCDHB11-202ENST00000624887 USP27XA6NNY8 438 aa22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 TNNT1P13805 278 aa22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 GTF2F1P35269 517 aaKnown RBP eCLIP22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 MKL1Q969V6 931 aa22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 TMEM260Q9NX78 707 aa22.27■■□□□ 1.16
PCDHB11-202ENST00000624887 MYL1P05976 194 aa22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 ATP2B2Q01814 1243 aa22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 CERKLQ49MI3 558 aaPredicted RBP22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 ZNF658Q5TYW1 1059 aaPredicted RBP22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 TTBK2Q6IQ55 1244 aa22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 MTMR8Q96EF0 704 aa22.27■■□□□ 1.15
PCDHB11-202ENST00000624887 STX17P56962 302 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 CCDC96Q2M329 555 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 CDKAL1Q5VV42 579 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 TATDN1Q6P1N9 297 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 CCDC112Q8NEF3 446 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 RASSF8Q8NHQ8 419 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 PDCL3Q9H2J4 239 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 NYAP2Q9P242 653 aa22.26■■□□□ 1.15
PCDHB11-202ENST00000624887 A0A1B0GTH6 734 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 PPP1R11O60927 126 aaPredicted RBP22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 TBX2Q13207 712 aaPredicted RBP22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 NR1I3Q14994 352 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 NYAP1Q6ZVC0 841 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 ZSCAN29Q8IWY8 852 aaPredicted RBP22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 TMX1Q9H3N1 280 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 CUEDC2Q9H467 287 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 KANSL2Q9H9L4 492 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 MAGEF1Q9HAY2 307 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 RIC8AQ9NPQ8 531 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 KBTBD4Q9NVX7 518 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 FAM196BA6NMK8 535 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 ZBTB7AO95365 584 aa22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 APTXQ7Z2E3 356 aaKnown RBP22.25■■□□□ 1.15
PCDHB11-202ENST00000624887 ZBTB5O15062 677 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms