RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
VTA1-205ENST00000620996 UIMC1Q96RL1 719 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
VTA1-205ENST00000620996 SHTN1A0MZ66 631 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 MARCH6O60337 910 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.6
VTA1-205ENST00000620996 CXCL9Q07325 125 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 TMEM179Q6ZVK1 233 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 SECISBP2LQ93073 1101 aaKnown RBP11.27□□□□□ -0.6
VTA1-205ENST00000620996 MTFR1LQ9H019 292 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 ZKSCAN5Q9Y2L8 839 aa11.27□□□□□ -0.6
VTA1-205ENST00000620996 A0A087X0B3 334 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 PP2D1A8MPX8 630 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 ENTPD3O75355 529 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
VTA1-205ENST00000620996 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 KLHL10Q6JEL2 608 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 TBCKQ8TEA7 893 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 CGNQ9P2M7 1197 aaKnown RBP11.27□□□□□ -0.61
VTA1-205ENST00000620996 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
VTA1-205ENST00000620996 PTGS1P23219 599 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 USH1GQ495M9 461 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 TMEM60Q9H2L4 133 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.61
VTA1-205ENST00000620996 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
VTA1-205ENST00000620996 TGFB2P61812 414 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 KARSQ15046 597 aaKnown RBP11.26□□□□□ -0.61
VTA1-205ENST00000620996 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 MYH8P13535 1937 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 UQCRHLA0A096LP55 91 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 SMTNL1A8MU46 457 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 F5H6K3 240 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 UQCRHP07919 91 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 UBA7P41226 1012 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 RASSF7Q02833 373 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 KLRC3Q07444 240 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 KANK3Q6NY19 840 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 CCDC186Q7Z3E2 898 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 C17orf53Q8N3J3 647 aaPredicted RBP11.26□□□□□ -0.61
VTA1-205ENST00000620996 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 MAN1B1Q9UKM7 699 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 FAM237AA0A1B0GTK4 181 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
VTA1-205ENST00000620996 NEMFO60524 1076 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 STAT6P42226 847 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 DHX8Q14562 1220 aaKnown RBP11.26□□□□□ -0.61
VTA1-205ENST00000620996 IL17AQ16552 155 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
VTA1-205ENST00000620996 TAL1P17542 331 aaPredicted RBP11.25□□□□□ -0.61
VTA1-205ENST00000620996 JAG1P78504 1218 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 CDC37Q16543 378 aaPredicted RBP11.25□□□□□ -0.61
VTA1-205ENST00000620996 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
VTA1-205ENST00000620996 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
VTA1-205ENST00000620996 IQUBQ8NA54 791 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 ZBTB5O15062 677 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 NDUFB10O96000 172 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 SERPINC1P01008 464 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 TXKP42681 527 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 ECE1P42892 770 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 RRP1BQ14684 758 aaKnown RBP11.25□□□□□ -0.61
VTA1-205ENST00000620996 CREBRFQ8IUR6 639 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 IFNKQ9P0W0 207 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 TUBE1Q9UJT0 475 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 UTRNP46939 3433 aa11.25□□□□□ -0.61
VTA1-205ENST00000620996 FOCADQ5VW36 1801 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 SLFN14P0C7P3 912 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 TECP42680 631 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 NOVP48745 357 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 DMTNQ08495 405 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 CUL5Q93034 780 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 COL4A5P29400 1685 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 PPP1R11O60927 126 aaPredicted RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 SMYD4Q8IYR2 804 aaPredicted RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 DCAF4Q8WV16 495 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms