RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SPTLC2O15270 562 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 WDHD1O75717 1129 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 RHBDL3P58872 404 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 PREPLQ4J6C6 727 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 THEMIS2Q5TEJ8 643 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 DIS3L2Q8IYB7 885 aaKnown RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 FANCBQ8NB91 859 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 CACTINQ8WUQ7 758 aaKnown RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 GPKOWQ92917 476 aaPredicted RBP eCLIP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 CRNKL1Q9BZJ0 848 aaKnown RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 TRIM5Q9C035 493 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 ANKRD2Q9GZV1 360 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 SUN2Q9UH99 717 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 PCDHAC2Q9Y5I4 1007 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 FAM196BA6NMK8 535 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 ADAMTS3O15072 1205 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 MMP10P09238 476 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 ZNF165P49910 485 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 MRPL12P52815 198 aaKnown RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 TFAP4Q01664 338 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 LAMB3Q13751 1172 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 KCNB1Q14721 858 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 NTRK3Q16288 839 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 SLC10A5Q5PT55 438 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 SPATA21Q7Z572 469 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 COL23A1Q86Y22 540 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 HOMER1Q86YM7 354 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 TRIM22Q8IYM9 498 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 GRAMD1CQ8IYS0 662 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 B4GALNT2Q8NHY0 566 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 RASGRP4Q8TDF6 673 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 STAMQ92783 540 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 CBX8Q9HC52 389 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 GGA1Q9UJY5 639 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
CPNE4-214ENST00000617767 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 MROH7-TTC4A0A0A0MT08 1334 aa6.24□□□□□ -1.41
CPNE4-214ENST00000617767 GNAT2P19087 354 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ACTN3Q08043 901 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 RBM12BQ8IXT5 1001 aaKnown RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 SAAL1Q96ER3 474 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 TMEM87BQ96K49 555 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CABS1Q96KC9 395 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ZSCAN10Q96SZ4 725 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 MTRQ99707 1265 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 BRWD3Q6RI45 1802 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 SBF2Q86WG5 1849 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CHUKO15111 745 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 FOXN1O15353 648 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 COBLO75128 1261 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CASP1P29466 404 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CHRNA5P30532 468 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 TCP10Q12799 353 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 MCM6Q14566 821 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 DBN1Q16643 649 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 EARS2Q5JPH6 523 aaKnown RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 LINC00301Q8NCQ3 95 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 PHACTR1Q9C0D0 580 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CLSTN2Q9H4D0 955 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CD209Q9NNX6 404 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 RTEL1Q9NZ71 1219 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 C4BP0C0L5 1744 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 XDHP47989 1333 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 BECN2A8MW95 431 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ATP8B1O43520 1251 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 PPFIA4O75335 1185 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CDC25AP30304 524 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ALDH1B1P30837 517 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 BTDP43251 543 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 SCNN1BP51168 640 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 EN1Q05925 392 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 SNW1Q13573 536 aaKnown RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CC2D1AQ6P1N0 951 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 NYAP1Q6ZVC0 841 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 USP49Q70CQ1 688 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ARMC9Q7Z3E5 817 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 ZNF804AQ7Z570 1209 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 CATIPQ7Z7H3 387 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 STAG2Q8N3U4 1231 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 MRPS27Q92552 414 aaKnown RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 IQCGQ9H095 443 aaKnown RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 RNF41Q9H4P4 317 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-214ENST00000617767 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 PCDHB6Q9Y5E3 794 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 TAF1LQ8IZX4 1826 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 BCORQ6W2J9 1755 aa6.23□□□□□ -1.41
CPNE4-214ENST00000617767 MYO1FO00160 1098 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 WNT7AO00755 349 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 TMEM62Q0P6H9 643 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PNOCQ13519 176 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CCDC181Q5TID7 509 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 C16orf87Q6PH81 154 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CEP57Q86XR8 500 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 RCOR1Q9UKL0 485 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CACNA1SQ13698 1873 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ELP1O95163 1332 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PNPLA7Q6ZV29 1317 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms