RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 YY1AP1Q9H869 796 aa25.03■■□□□ 1.6
SHANK2-220ENST00000608988 DISC1Q9NRI5 854 aa25.03■■□□□ 1.6
SHANK2-220ENST00000608988 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
SHANK2-220ENST00000608988 GOLGA8KD6RF30 607 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 ENC1O14682 589 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 CLSTN1O94985 981 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 NT5C2P49902 561 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 PPFIA1Q13136 1202 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 C4orf32Q8N8J7 132 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 PIK3AP1Q6ZUJ8 805 aa25.02■■□□□ 1.6
SHANK2-220ENST00000608988 GIMAP8Q8ND71 665 aaPredicted RBP25.02■■□□□ 1.6
SHANK2-220ENST00000608988 BICDL2A1A5D9 508 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 GOLGA6BA6NDN3 693 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 ORC4O43929 436 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 COBLO75128 1261 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 MCM7P33993 719 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 GGCXP38435 758 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 VAV2P52735 878 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 TRIM58Q8NG06 486 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 CCDC47Q96A33 483 aaKnown RBP25.01■■□□□ 1.59
SHANK2-220ENST00000608988 TRIM47Q96LD4 638 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 NHEJ1Q9H9Q4 299 aaPredicted RBP25.01■■□□□ 1.59
SHANK2-220ENST00000608988 GNL3LQ9NVN8 582 aaKnown RBP25.01■■□□□ 1.59
SHANK2-220ENST00000608988 JRKLQ9Y4A0 524 aa25.01■■□□□ 1.59
SHANK2-220ENST00000608988 IL6STP40189 918 aaPredicted RBP25■■□□□ 1.59
SHANK2-220ENST00000608988 KIF5AQ12840 1032 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 TTI2Q6NXR4 508 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 CCSER1Q9C0I3 900 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 GOLGA6CA6NDK9 693 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 AGPSO00116 658 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 LAD1O00515 517 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 OPA1O60313 960 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 GOLGA6DP0CG33 693 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 IGHMBP2P38935 993 aaKnown RBP25■■□□□ 1.59
SHANK2-220ENST00000608988 BCAMP50895 628 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 SRBD1Q8N5C6 995 aaKnown RBP25■■□□□ 1.59
SHANK2-220ENST00000608988 SECISBP2LQ93073 1101 aaKnown RBP25■■□□□ 1.59
SHANK2-220ENST00000608988 RIOK1Q9BRS2 568 aaKnown RBP25■■□□□ 1.59
SHANK2-220ENST00000608988 GOLGA6AQ9NYA3 693 aa25■■□□□ 1.59
SHANK2-220ENST00000608988 USO1O60763 962 aaKnown RBP24.99■■□□□ 1.59
SHANK2-220ENST00000608988 EPB41P11171 864 aaKnown RBP24.99■■□□□ 1.59
SHANK2-220ENST00000608988 TNFRSF8P28908 595 aa24.99■■□□□ 1.59
SHANK2-220ENST00000608988 TADA2BQ86TJ2 420 aa24.99■■□□□ 1.59
SHANK2-220ENST00000608988 PACS2Q86VP3 889 aa24.99■■□□□ 1.59
SHANK2-220ENST00000608988 ZNF804BA4D1E1 1349 aa24.99■■□□□ 1.59
SHANK2-220ENST00000608988 KLRC4O43908 158 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 IDEP14735 1019 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 HNRNPH3P31942 346 aaKnown RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 CCDC152Q4G0S7 254 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 ALS2CLQ60I27 953 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 SUGP1Q8IWZ8 645 aaKnown RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 SDR42E1Q8WUS8 393 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 CAPZA3Q96KX2 299 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 ERGIC2Q96RQ1 377 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 SH3GL2Q99962 352 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 TUBGCP2Q9BSJ2 902 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 KBTBD4Q9NVX7 518 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 SNX12Q9UMY4 172 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 ITGB4P16144 1822 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 hCG_1642624A0A1W2PR95 340 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 SRGAP2O75044 1071 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 TACC1O75410 805 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 TRIM21P19474 475 aaKnown RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 KIF5BP33176 963 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 COBLL1Q53SF7 1204 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 DTHD1Q6ZMT9 781 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 DZIP3Q86Y13 1208 aaKnown RBP24.98■■□□□ 1.59
SHANK2-220ENST00000608988 CCDC155Q8N6L0 562 aa24.98■■□□□ 1.59
SHANK2-220ENST00000608988 LAMB2P55268 1798 aa24.97■■□□□ 1.59
SHANK2-220ENST00000608988 CCNE1P24864 410 aa24.97■■□□□ 1.59
SHANK2-220ENST00000608988 SPA17Q15506 151 aa24.97■■□□□ 1.59
SHANK2-220ENST00000608988 GALNT17Q6IS24 598 aa24.97■■□□□ 1.59
SHANK2-220ENST00000608988 ZSCAN29Q8IWY8 852 aaPredicted RBP24.97■■□□□ 1.59
SHANK2-220ENST00000608988 BLIDQ8IZY5 108 aa24.97■■□□□ 1.59
SHANK2-220ENST00000608988 ATXN2Q99700 1313 aaKnown RBP24.97■■□□□ 1.59
SHANK2-220ENST00000608988 CICQ96RK0 1608 aaPredicted RBP24.96■■□□□ 1.59
SHANK2-220ENST00000608988 TRIM49BA6NDI0 452 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 PRPHP41219 470 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 IRAK1P51617 712 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 NNTQ13423 1086 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 EMBQ6PCB8 327 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 LACRTQ9GZZ8 138 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 B4DLN1 442 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 TCP1P17987 556 aaKnown RBP24.96■■□□□ 1.59
SHANK2-220ENST00000608988 HOXA7P31268 230 aaPredicted RBP24.96■■□□□ 1.59
SHANK2-220ENST00000608988 TBC1D8BQ0IIM8 1120 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 NAALADL2Q58DX5 795 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 JADE2Q9NQC1 790 aa24.96■■□□□ 1.59
SHANK2-220ENST00000608988 RNF216Q9NWF9 866 aaPredicted RBP24.96■■□□□ 1.59
SHANK2-220ENST00000608988 CACNA1SQ13698 1873 aa24.95■■□□□ 1.58
SHANK2-220ENST00000608988 PDE2AO00408 941 aaPredicted RBP24.95■■□□□ 1.58
SHANK2-220ENST00000608988 PES1O00541 588 aaKnown RBP24.95■■□□□ 1.58
SHANK2-220ENST00000608988 EBAG9O00559 213 aa24.95■■□□□ 1.58
SHANK2-220ENST00000608988 GTF2A1P52655 376 aaPredicted RBP24.95■■□□□ 1.58
SHANK2-220ENST00000608988 EPHB4P54760 987 aa24.95■■□□□ 1.58
SHANK2-220ENST00000608988 ADGRA1Q86SQ6 560 aa24.95■■□□□ 1.58
SHANK2-220ENST00000608988 CSGALNACT2Q8N6G5 542 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms