RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 ALAS1P13196 640 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 PRKAR2AP13861 404 aaKnown RBP18.8■□□□□ 0.6
CCDC61-208ENST00000601763 ZKSCAN1P17029 563 aaPredicted RBP18.8■□□□□ 0.6
CCDC61-208ENST00000601763 CCND3P30281 292 aaPredicted RBP18.8■□□□□ 0.6
CCDC61-208ENST00000601763 NT5C2P49902 561 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 WTAPQ15007 396 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 DPP9Q86TI2 863 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 TRPV1Q8NER1 839 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 FGD4Q96M96 766 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 RNF208Q9H0X6 261 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 MAD2L2Q9UI95 211 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 SNX14Q9Y5W7 946 aa18.8■□□□□ 0.6
CCDC61-208ENST00000601763 DDX49Q9Y6V7 483 aaKnown RBP18.8■□□□□ 0.6
CCDC61-208ENST00000601763 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
CCDC61-208ENST00000601763 HSPA4P34932 840 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 RGS19P49795 217 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 ZNF792Q3KQV3 632 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 PRAMEF19Q5SWL8 479 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 KCNB2Q92953 911 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 PURBQ96QR8 312 aaKnown RBP18.79■□□□□ 0.6
CCDC61-208ENST00000601763 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
CCDC61-208ENST00000601763 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 DNAJC25-GNG10A0A024R161 153 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
CCDC61-208ENST00000601763 RXRAP19793 462 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 MCM5P33992 734 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 OAZ1P54368 228 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 UBXN2AP68543 259 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
CCDC61-208ENST00000601763 CNTN2Q02246 1040 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 TROAPQ12815 778 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 TSGA10IPQ3SY00 556 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
CCDC61-208ENST00000601763 ABRAQ8N0Z2 381 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 MAML3Q96JK9 1138 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 NEK1Q96PY6 1258 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC61-208ENST00000601763 JMJD4Q9H9V9 463 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 CCPG1Q9ULG6 757 aa18.78■□□□□ 0.6
CCDC61-208ENST00000601763 PALM3A6NDB9 673 aaPredicted RBP18.77■□□□□ 0.6
CCDC61-208ENST00000601763 ICAM1P05362 532 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 KCTD2Q14681 263 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 GRM4Q14833 912 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 ASPRV1Q53RT3 343 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 RNF20Q5VTR2 975 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 USP26Q9BXU7 913 aa18.77■□□□□ 0.6
CCDC61-208ENST00000601763 A1CFQ9NQ94 594 aaKnown RBP18.77■□□□□ 0.6
CCDC61-208ENST00000601763 PAK6Q9NQU5 681 aaPredicted RBP18.77■□□□□ 0.6
CCDC61-208ENST00000601763 ASTN1O14525 1302 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 LCTP09848 1927 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 ERICH2A1L162 156 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 KLRF2D3W0D1 207 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 NFIBO00712 420 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 PPP1R11O60927 126 aaPredicted RBP18.76■□□□□ 0.59
CCDC61-208ENST00000601763 SEC24BO95487 1268 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 GJB1P08034 283 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 FDX1P10109 184 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 ZNF654Q8IZM8 581 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 CHST13Q8NET6 341 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
CCDC61-208ENST00000601763 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
CCDC61-208ENST00000601763 MKI67P46013 3256 aaKnown RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 CYTH3O43739 400 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 REC8O95072 547 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 COPB2P35606 906 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 SART3Q15020 963 aaKnown RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 CDC37Q16543 378 aaPredicted RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 QRICH1Q2TAL8 776 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 USH1GQ495M9 461 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 CCDC144CPQ8IYA2 1237 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 CMTR1Q8N1G2 835 aaKnown RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 NUP133Q8WUM0 1156 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 TBC1D5Q92609 795 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
CCDC61-208ENST00000601763 ACAD9Q9H845 621 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
CCDC61-208ENST00000601763 RPTORQ8N122 1335 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 BAZ2BQ9UIF8 2168 aaKnown RBP18.74■□□□□ 0.59
CCDC61-208ENST00000601763 SOWAHBA6NEL2 793 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 GJA8P48165 433 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 ANKRD35Q8N283 1001 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 TMEM87BQ96K49 555 aa18.74■□□□□ 0.59
CCDC61-208ENST00000601763 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
CCDC61-208ENST00000601763 DHX16O60231 1041 aaKnown RBP18.73■□□□□ 0.59
CCDC61-208ENST00000601763 PLEKHA8P1O95397 391 aa18.73■□□□□ 0.59
CCDC61-208ENST00000601763 SGPL1O95470 568 aa18.73■□□□□ 0.59
CCDC61-208ENST00000601763 CYBAP13498 195 aa18.73■□□□□ 0.59
CCDC61-208ENST00000601763 MFSD14CQ5VZR4 134 aa18.73■□□□□ 0.59
CCDC61-208ENST00000601763 ANO1Q5XXA6 986 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms