RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GJD2Q9UKL4 321 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 SLC12A7Q9Y666 1083 aa22.92■■□□□ 1.26
SHKBP1-214ENST00000597396 KLRF2D3W0D1 207 aa22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 STRNO43815 780 aa22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 IRF5Q13568 498 aa22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 SLC9C1Q4G0N8 1177 aa22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 SGMS1Q86VZ5 419 aa22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 CTCFLQ8NI51 663 aaPredicted RBP22.91■■□□□ 1.26
SHKBP1-214ENST00000597396 ZNF536O15090 1300 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 PALM3A6NDB9 673 aaPredicted RBP22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 ADCY3O60266 1144 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CALM1P0DP23 149 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CALM2P0DP24 149 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CALM3P0DP25 149 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 FCER1AP12319 257 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CYP2B6P20813 491 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 KIF5BP33176 963 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 RGS2P41220 211 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 MAP2K5Q13163 448 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 MORN1Q5T089 497 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 Q6ZUG5 572 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 AGBL1Q96MI9 1066 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 TM6SF1Q9BZW5 370 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 VAT1LQ9HCJ6 419 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CCPG1Q9ULG6 757 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 RIPK3Q9Y572 518 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 CYP46A1Q9Y6A2 500 aa22.9■■□□□ 1.26
SHKBP1-214ENST00000597396 TNRC18O15417 2968 aaPredicted RBP22.89■■□□□ 1.26
SHKBP1-214ENST00000597396 ICAM1P05362 532 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 ALAS1P13196 640 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 GRK4P32298 578 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 ANAPC15P60006 121 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 GRB14Q14449 540 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 RUFY3Q7L099 469 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 RAB11FIP4Q86YS3 637 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 ADGRF4Q8IZF3 695 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 SLAIN1Q8ND83 568 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 MMP19Q99542 508 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 MAP3K14Q99558 947 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 ZSWIM6Q9HCJ5 1215 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 HOMER2Q9NSB8 354 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 FBXO40Q9UH90 709 aa22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 NAP1L2Q9ULW6 460 aaPredicted RBP22.89■■□□□ 1.25
SHKBP1-214ENST00000597396 SLC34A2O95436 690 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 RXRAP19793 462 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 ADORA2AP29274 412 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 KCTD2Q14681 263 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 CDC37Q16543 378 aaPredicted RBP22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 TKFCQ3LXA3 575 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 NBPF11Q86T75 865 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 MICU3Q86XE3 530 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 ABRAQ8N0Z2 381 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 CHST13Q8NET6 341 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 APBA2Q99767 749 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 RNF146Q9NTX7 359 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 BIN2Q9UBW5 565 aaPredicted RBP22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 PNMA2Q9UL42 364 aa22.88■■□□□ 1.25
SHKBP1-214ENST00000597396 RBBP6Q7Z6E9 1792 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 KLF18A0A0U1RQI7 1052 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 ELNP15502 786 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 APOA5Q6Q788 366 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 DPP9Q86TI2 863 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 CCDC144CPQ8IYA2 1237 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 SH3TC2Q8TF17 1288 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 USP6NLQ92738 828 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 TRERF1Q96PN7 1200 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 UPF3BQ9BZI7 483 aaKnown RBP22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 ACAD9Q9H845 621 aa22.87■■□□□ 1.25
SHKBP1-214ENST00000597396 GNAQP50148 359 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 PXYLP1Q8TE99 480 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 BRF1Q92994 677 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 JMJD4Q9H9V9 463 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 SLC5A4Q9NY91 659 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 BRPF3Q9ULD4 1205 aa22.86■■□□□ 1.25
SHKBP1-214ENST00000597396 ZBTB43O43298 467 aa22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 XRCC5P13010 732 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 TAL1P17542 331 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 APOBRQ0VD83 1088 aa22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 TRMT44Q8IYL2 757 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 ANKRD35Q8N283 1001 aa22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 DDX11Q96FC9 970 aa22.85■■□□□ 1.25
SHKBP1-214ENST00000597396 QRICH1Q2TAL8 776 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 USH1GQ495M9 461 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 PRPF38BQ5VTL8 546 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 HOMER1Q86YM7 354 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 FANCBQ8NB91 859 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 ARMC5Q96C12 935 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 LZTS2Q9BRK4 669 aa22.84■■□□□ 1.25
SHKBP1-214ENST00000597396 GOLGA8AA7E2F4 631 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 GOLGA8BA8MQT2 603 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 HOXC6P09630 235 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 UBXN2AP68543 259 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 RTN1Q16799 776 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 FBXO11Q86XK2 927 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 FBXL16Q8N461 479 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 NPLOC4Q8TAT6 608 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 AGXT2Q9BYV1 514 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 RIOX1Q9H6W3 641 aa22.83■■□□□ 1.25
SHKBP1-214ENST00000597396 PDRG1Q9NUG6 133 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms