RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 FGD4Q96M96 766 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 ZHX1Q9UKY1 873 aaPredicted RBP18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 HIP1O00291 1037 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 RARBP10826 455 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 MAGEA10P43363 369 aaPredicted RBP18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 MUM1L1Q5H9M0 696 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 GDF15Q99988 308 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 NRBP1Q9UHY1 535 aa18.35■□□□□ 0.53
PPFIA4-208ENST00000597023 PLA2G6O60733 806 aa18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 FDX1P10109 184 aa18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 RTP1P59025 263 aa18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 A1CFQ9NQ94 594 aaKnown RBP18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
PPFIA4-208ENST00000597023 CEP290O15078 2479 aa18.33■□□□□ 0.53
PPFIA4-208ENST00000597023 B4E1Z4 1266 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 KDM4AO75164 1064 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 AKR1A1P14550 325 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 SYDE2Q5VT97 1194 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 MAMDC4Q6UXC1 1216 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 SLC39A5Q6ZMH5 540 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 ESR2Q92731 530 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 CCPG1Q9ULG6 757 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 FRMPD3Q5JV73 1810 aa18.33■□□□□ 0.52
PPFIA4-208ENST00000597023 SYNGAP1Q96PV0 1343 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 POTEB2H3BUK9 544 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 PDHBP11177 359 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 ACVR2BQ13705 512 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 ARMCX2Q7L311 632 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 FAM184BQ9ULE4 1060 aa18.32■□□□□ 0.52
PPFIA4-208ENST00000597023 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 SOX1O00570 391 aaPredicted RBP18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 ADCY6O43306 1168 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 TKFCQ3LXA3 575 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 TRIM60Q495X7 471 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 BTNL9Q6UXG8 535 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 ZNF467Q7Z7K2 595 aaPredicted RBP18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 TTC14Q96N46 770 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 CPVLQ9H3G5 476 aa18.31■□□□□ 0.52
PPFIA4-208ENST00000597023 MYADML2A6NDP7 307 aa18.3■□□□□ 0.52
PPFIA4-208ENST00000597023 IMMTQ16891 758 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-208ENST00000597023 RNF180Q86T96 592 aa18.3■□□□□ 0.52
PPFIA4-208ENST00000597023 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-208ENST00000597023 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 SMCHD1A6NHR9 2005 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 TRIOBPQ9H2D6 2365 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ADAMTS4O75173 837 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ICAM1P05362 532 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 BMP8BP34820 402 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 CCDC144BQ3MJ40 725 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 LRCH3Q96II8 777 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 PRDM5Q9NQX1 630 aaPredicted RBP18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
PPFIA4-208ENST00000597023 ASTN1O14525 1302 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 SYNRGQ9UMZ2 1314 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 NFIBO00712 420 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 PTGS1P23219 599 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 CHMLP26374 656 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 PTH1RQ03431 593 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 EEPD1Q7L9B9 569 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 DGKHQ86XP1 1220 aa18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 ZSCAN10Q96SZ4 725 aaPredicted RBP18.28■□□□□ 0.52
PPFIA4-208ENST00000597023 A0A1W2PPC1 479 aa18.27■□□□□ 0.52
PPFIA4-208ENST00000597023 A0A1W2PQ45 241 aaPredicted RBP18.27■□□□□ 0.52
PPFIA4-208ENST00000597023 A0A1W2PQY0 241 aa18.27■□□□□ 0.52
PPFIA4-208ENST00000597023 SNHG28P0DPA3 235 aa18.27■□□□□ 0.52
PPFIA4-208ENST00000597023 BAATQ14032 418 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms