RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 KRT23Q9C075 422 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 PNMA2Q9UL42 364 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 CNPY2Q9Y2B0 182 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 DNAH12Q6ZR08 3092 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 ICAM1P05362 532 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
CCDC9-203ENST00000596938 SLC16A2P36021 539 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 SYDE2Q5VT97 1194 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 ZSCAN10Q96SZ4 725 aaPredicted RBP12.36□□□□□ -0.43
CCDC9-203ENST00000596938 ZKSCAN3Q9BRR0 538 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 SENP6Q9GZR1 1112 aaPredicted RBP12.36□□□□□ -0.43
CCDC9-203ENST00000596938 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
CCDC9-203ENST00000596938 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 HOMER2Q9NSB8 354 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 RNF146Q9NTX7 359 aa12.36□□□□□ -0.43
CCDC9-203ENST00000596938 B4E1Z4 1266 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 SGSM2O43147 1006 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 RARBP10826 455 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 ALAS1P13196 640 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 SNAP25P60880 206 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
CCDC9-203ENST00000596938 GJC2Q5T442 439 aaPredicted RBP12.35□□□□□ -0.43
CCDC9-203ENST00000596938 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 FGD4Q96M96 766 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 A1CFQ9NQ94 594 aaKnown RBP12.35□□□□□ -0.43
CCDC9-203ENST00000596938 FAM184BQ9ULE4 1060 aa12.35□□□□□ -0.43
CCDC9-203ENST00000596938 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
CCDC9-203ENST00000596938 KBTBD13C9JR72 458 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 AKR1A1P14550 325 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 CNTN2Q02246 1040 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 PTH1RQ03431 593 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 LRRC41Q15345 812 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 MUM1L1Q5H9M0 696 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
CCDC9-203ENST00000596938 C7orf61Q8IZ16 206 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
CCDC9-203ENST00000596938 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 KAT14Q9H8E8 782 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
CCDC9-203ENST00000596938 CYP39A1Q9NYL5 469 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
CCDC9-203ENST00000596938 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
CCDC9-203ENST00000596938 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
CCDC9-203ENST00000596938 PARP14Q460N5 1801 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 ASB14A6NK59 587 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 CYP21A2P08686 494 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 BMP8BP34820 402 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 TRDNQ13061 729 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 C1orf53Q5VUE5 145 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 ARMCX2Q7L311 632 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 RNF180Q86T96 592 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
CCDC9-203ENST00000596938 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 DUSP11O75319 330 aaKnown RBP12.32□□□□□ -0.44
CCDC9-203ENST00000596938 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 CLEC4DQ8WXI8 215 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 GDF15Q99988 308 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
CCDC9-203ENST00000596938 MAF1Q9H063 256 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 KATNBL1Q9H079 304 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 TNKSO95271 1327 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
CCDC9-203ENST00000596938 CEP290O15078 2479 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 ADAMTS4O75173 837 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 PGK1P00558 417 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 SNX17Q15036 470 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 SEC23AQ15436 765 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 IFIT1BQ5T764 474 aaKnown RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 CYB5R4Q7L1T6 521 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 KLHDC9Q8NEP7 349 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms